Analysis of interatomic Contacts of Structural Units in PDB entry:
1OW1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OW1 entry

There is 1 chain in PDB entry 1OW1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 3495VAL 3664
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 7 helices in PDB entry 1OW1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3500 3505Right-handed alpha
Helix 2
2
A
3530 3538Right-handed alpha
Helix 3
3
A
3556 3567Right-handed alpha
Helix 4
4
A
3584 3599Right-handed alpha
Helix 5
5
A
3599 3607Right-handed alpha
Helix 6
6
A
3632 3643Right-handed alpha
Helix 7
7
A
3643 3651Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 1OW1.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3547 3549first strand
Strand 2
A
3507 3515parallel
Strand 3
A
3518 3529anti-parallel
Strand 4
A
3573 3580anti-parallel
Strand 5
A
3657 3663anti-parallel
Strand 6
A
3624 3629anti-parallel
Strand 7
A
3608 3614anti-parallel
Strand 8
A
3551 3554anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il