Analysis of interatomic Contacts of Structural Units in PDB entry:
1OXC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OXC entry

There are 4 chains in PDB entry 1OXC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1GLY 114
B
 ALA 1GLY 114
C
 ALA 1GLY 114
D
 ALA 1GLY 114
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 1OXC

There are 3 sheets in PDB entry 1OXC. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 20 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 7first strand
Strand 2
A
62 69anti-parallel
Strand 3
A
72 73anti-parallel
Strand 4
A
62 69anti-parallel
Strand 5
A
13 32anti-parallel
Strand 6
A
35 56anti-parallel
Strand 7
A
13 32anti-parallel
Strand 8
A
105 111anti-parallel
Strand 9
A
87 95anti-parallel
Strand 10
A
75 83anti-parallel
Strand 11
D
75 83anti-parallel
Strand 12
D
87 95anti-parallel
Strand 13
D
105 111anti-parallel
Strand 14
D
13 32anti-parallel
Strand 15
D
35 56anti-parallel
Strand 16
D
13 32anti-parallel
Strand 17
D
62 69anti-parallel
Strand 18
D
5 7anti-parallel
Strand 19
D
62 69anti-parallel
Strand 20
D
72 73anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 7first strand
Strand 2
B
62 69anti-parallel
Strand 3
B
72 73anti-parallel
Strand 4
B
62 69anti-parallel
Strand 5
B
26 32anti-parallel
Strand 6
B
35 42anti-parallel
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There are 15 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 56first strand
Strand 2
B
13 20anti-parallel
Strand 3
B
105 111anti-parallel
Strand 4
B
87 95anti-parallel
Strand 5
B
75 83anti-parallel
Strand 6
C
75 83anti-parallel
Strand 7
C
87 95anti-parallel
Strand 8
C
105 111anti-parallel
Strand 9
C
13 32anti-parallel
Strand 10
C
35 56anti-parallel
Strand 11
C
13 32anti-parallel
Strand 12
C
62 69anti-parallel
Strand 13
C
5 7anti-parallel
Strand 14
C
62 69anti-parallel
Strand 15
C
72 73anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il