Analysis of interatomic Contacts of Structural Units in PDB entry:
1OZF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OZF entry

There are 2 chains in PDB entry 1OZF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 7HIS 554
B
 TYR 5HIS 554
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 1OZF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 24Right-handed alpha
Helix 2
2
A
34 36Right-handed 310
Helix 3
3
A
37 45Right-handed alpha
Helix 4
4
A
56 72Right-handed alpha
Helix 5
5
A
82 87Right-handed alpha
Helix 6
6
A
88 99Right-handed alpha
Helix 7
7
A
123 129Right-handed alpha
Helix 8
8
A
130 132Right-handed 310
Helix 9
9
A
140 142Right-handed 310
Helix 10
10
A
143 157Right-handed alpha
Helix 11
11
A
169 174Right-handed alpha
Helix 12
12
A
193 207Right-handed alpha
Helix 13
13
A
216 222Right-handed 310
Helix 14
14
A
223 235Right-handed alpha
Helix 15
15
A
242 245Right-handed 310
Helix 16
16
A
249 253Right-handed 310
Helix 17
17
A
266 275Right-handed alpha
Helix 18
18
A
284 288Right-handed 310
Helix 19
19
A
289 293Right-handed 310
Helix 20
20
A
323 333Right-handed alpha
Helix 21
21
A
342 360Right-handed alpha
Helix 22
22
A
372 384Right-handed alpha
Helix 23
23
A
395 404Right-handed alpha
Helix 24
24
A
405 408Right-handed 310
Helix 25
25
A
424 436Right-handed alpha
Helix 26
26
A
447 454Right-handed alpha
Helix 27
27
A
455 464Right-handed alpha
Helix 28
28
A
477 489Right-handed alpha
Helix 29
29
A
500 507Right-handed alpha
Helix 30
30
A
517 519Right-handed 310
Helix 31
31
A
520 531Right-handed alpha
Helix 32
32
A
545 551Right-handed alpha
Helix 33
33
B
12 24Right-handed alpha
Helix 34
34
B
37 45Right-handed alpha
Helix 35
35
B
56 72Right-handed alpha
Helix 36
36
B
82 87Right-handed alpha
Helix 37
37
B
88 99Right-handed alpha
Helix 38
38
B
110 114Right-handed 310
Helix 39
39
B
123 129Right-handed alpha
Helix 40
40
B
130 132Right-handed 310
Helix 41
41
B
140 142Right-handed 310
Helix 42
42
B
143 157Right-handed alpha
Helix 43
43
B
169 174Right-handed alpha
Helix 44
44
B
193 207Right-handed alpha
Helix 45
45
B
216 222Right-handed 310
Helix 46
46
B
223 235Right-handed alpha
Helix 47
47
B
242 245Right-handed 310
Helix 48
48
B
266 275Right-handed alpha
Helix 49
49
B
284 288Right-handed 310
Helix 50
50
B
289 293Right-handed 310
Helix 51
51
B
323 333Right-handed alpha
Helix 52
52
B
342 361Right-handed alpha
Helix 53
53
B
372 384Right-handed alpha
Helix 54
54
B
395 404Right-handed alpha
Helix 55
55
B
405 408Right-handed 310
Helix 56
56
B
424 436Right-handed alpha
Helix 57
57
B
447 454Right-handed alpha
Helix 58
58
B
455 464Right-handed alpha
Helix 59
59
B
477 489Right-handed alpha
Helix 60
60
B
500 508Right-handed alpha
Helix 61
61
B
517 519Right-handed 310
Helix 62
62
B
520 530Right-handed alpha
Helix 63
63
B
542 544Right-handed 310
Helix 64
64
B
545 551Right-handed alpha
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There are 8 sheets in PDB entry 1OZF. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 10first strand
Strand 2
A
176 178anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 53first strand
Strand 2
A
28 32parallel
Strand 3
A
75 79parallel
Strand 4
A
102 108parallel
Strand 5
A
162 168parallel
Strand 6
A
134 137parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
256 259first strand
Strand 2
A
238 240parallel
Strand 3
A
210 214parallel
Strand 4
A
277 281parallel
Strand 5
A
299 304parallel
Strand 6
A
318 321parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
412 414first strand
Strand 2
A
388 392parallel
Strand 3
A
440 446parallel
Strand 4
A
467 473parallel
Strand 5
A
535 540parallel
Strand 6
A
511 514parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 10first strand
Strand 2
B
176 178anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 53first strand
Strand 2
B
28 32parallel
Strand 3
B
75 79parallel
Strand 4
B
102 108parallel
Strand 5
B
162 168parallel
Strand 6
B
134 137parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
256 259first strand
Strand 2
B
238 240parallel
Strand 3
B
210 214parallel
Strand 4
B
277 281parallel
Strand 5
B
299 304parallel
Strand 6
B
318 321parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
412 414first strand
Strand 2
B
389 392parallel
Strand 3
B
441 446parallel
Strand 4
B
467 473parallel
Strand 5
B
535 540parallel
Strand 6
B
511 514parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il