Analysis of interatomic Contacts of Structural Units in PDB entry:
1PHO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1PHO entry

There is 1 chain in PDB entry 1PHO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 1PHE 340
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 1PHO. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
105 110Right-handed alpha
Helix 2
2
A
197 201Right-handed 310
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There is 1 sheet ( A) in PDB entry 1PHO.

There are 19 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
4 5first strand
Strand 2
A
36 37first strand
Strand 3
A
40 49first strand
Strand 4
A
55 66anti-parallel
Strand 5
A
79 90anti-parallel
Strand 6
A
94 102anti-parallel
Strand 7
A
132 142anti-parallel
Strand 8
A
151 158anti-parallel
Strand 9
A
173 182anti-parallel
Strand 10
A
185 195anti-parallel
Strand 11
A
210 222anti-parallel
Strand 12
A
225 235anti-parallel
Strand 13
A
253 263anti-parallel
Strand 14
A
269 281anti-parallel
Strand 15
A
290 302anti-parallel
Strand 16
A
307 316anti-parallel
Strand 17
A
331 340anti-parallel
Strand 18
A
10 24anti-parallel
Strand 19
A
36 37anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il