Analysis of interatomic Contacts of Structural Units in PDB entry:
1QON


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1QON entry

There is 1 chain in PDB entry 1QON (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 1TRP 573
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 27 helices in PDB entry 1QON. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
39 43Right-handed 310
Helix 2
2
A
77 82Right-handed alpha
Helix 3
3
A
159 163Right-handed 310
Helix 4
4
A
164 172Right-handed alpha
Helix 5
5
A
183 188Right-handed alpha
Helix 6
6
A
190 194Right-handed 310
Helix 7
7
A
195 202Right-handed 310
Helix 8
8
A
205 222Right-handed alpha
Helix 9
9
A
223 225Right-handed 310
Helix 10
10
A
238 250Right-handed alpha
Helix 11
11
A
275 290Right-handed alpha
Helix 12
12
A
293 297Right-handed 310
Helix 13
13
A
300 309Right-handed alpha
Helix 14
14
A
312 320Right-handed alpha
Helix 15
15
A
321 324Right-handed 310
Helix 16
16
A
348 352Right-handed 310
Helix 17
17
A
368 376Right-handed alpha
Helix 18
18
A
389 401Right-handed alpha
Helix 19
19
A
405 416Right-handed alpha
Helix 20
20
A
424 440Right-handed alpha
Helix 21
21
A
440 454Right-handed alpha
Helix 22
22
A
473 477Right-handed 310
Helix 23
23
A
482 488Right-handed alpha
Helix 24
24
A
489 493Right-handed 310
Helix 25
25
A
499 520Right-handed alpha
Helix 26
26
A
553 565Right-handed alpha
Helix 27
27
A
566 571Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 1QON. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
6 9first strand
Strand 2
A
12 15anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
18 21first strand
Strand 2
A
24 33anti-parallel
Strand 3
A
95 101anti-parallel
Strand 4
A
174 178anti-parallel
Strand 5
A
143 147parallel
Strand 6
A
232 237parallel
Strand 7
A
259 263parallel
Strand 8
A
358 362parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
460 463first strand
Strand 2
A
539 542parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il