Analysis of interatomic Contacts of Structural Units in PDB entry:
1R8U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1R8U entry

There are 2 chains in PDB entry 1R8U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 220SER 269
B
 ALA 340ARG 439
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 1R8U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
224 236Right-handed alpha
Helix 2
2
A
237 240Right-handed 310
Helix 3
3
A
250 254Right-handed 310
Helix 4
4
A
265 269Right-handed 310
Helix 5
5
B
347 372Right-handed alpha
Helix 6
6
B
383 395Right-handed alpha
Helix 7
7
B
405 422Right-handed alpha
Helix 8
8
B
428 436Right-handed alpha
Helix 9
9
B
437 439Right-handed 310
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There are no sheets in PDB entry 1R8U
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il