Analysis of interatomic Contacts of Structural Units in PDB entry:
1RKC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1RKC entry

There are 2 chains in PDB entry 1RKC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TRP 258
B
 TYR 1944ALA 1969
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1RKC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 14Right-handed alpha
Helix 2
2
A
14 26Right-handed alpha
Helix 3
3
A
37 41Right-handed 310
Helix 4
4
A
52 64Right-handed alpha
Helix 5
5
A
67 72Right-handed alpha
Helix 6
6
A
73 83Right-handed alpha
Helix 7
7
A
83 88Right-handed alpha
Helix 8
8
A
90 94Right-handed 310
Helix 9
9
A
103 106Right-handed 310
Helix 10
10
A
107 148Right-handed alpha
Helix 11
11
A
149 151Right-handed 310
Helix 12
12
A
153 180Right-handed alpha
Helix 13
13
A
184 216Right-handed alpha
Helix 14
14
A
223 252Right-handed alpha
Helix 15
15
B
1947 1964Right-handed alpha
Helix 16
16
B
1965 1968Right-handed 310
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There are no sheets in PDB entry 1RKC
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