Analysis of interatomic Contacts of Structural Units in PDB entry:
1RKE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1RKE entry

There are 2 chains in PDB entry 1RKE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -3TRP 258
B
 ASP 882PRO 1063
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1RKE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 32Right-handed alpha
Helix 2
2
A
40 60Right-handed alpha
Helix 3
3
A
67 96Right-handed alpha
Helix 4
4
A
101 148Right-handed alpha
Helix 5
5
A
149 151Right-handed 310
Helix 6
6
A
153 180Right-handed alpha
Helix 7
7
A
184 217Right-handed alpha
Helix 8
8
A
223 248Right-handed alpha
Helix 9
9
A
252 256Right-handed 310
Helix 10
10
B
895 910Right-handed alpha
Helix 11
11
B
917 935Right-handed alpha
Helix 12
12
B
943 971Right-handed alpha
Helix 13
13
B
974 1004Right-handed alpha
Helix 14
14
B
1013 1044Right-handed alpha
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There are no sheets in PDB entry 1RKE
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