Analysis of interatomic Contacts of Structural Units in PDB entry:
1T08


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1T08 entry

There are 3 chains in PDB entry 1T08 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 146GLU 664
B
 GLY 8SER 53
C
 ASP 1484ASP 1498
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 1T08. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
146 151Right-handed alpha
Helix 2
2
A
151 160Right-handed alpha
Helix 3
3
A
164 180Right-handed alpha
Helix 4
4
A
181 190Right-handed alpha
Helix 5
5
A
191 203Right-handed alpha
Helix 6
6
A
207 222Right-handed alpha
Helix 7
7
A
224 234Right-handed alpha
Helix 8
8
A
235 243Right-handed alpha
Helix 9
9
A
244 246Right-handed 310
Helix 10
10
A
248 266Right-handed alpha
Helix 11
11
A
268 276Right-handed alpha
Helix 12
12
A
277 286Right-handed alpha
Helix 13
13
A
290 306Right-handed alpha
Helix 14
14
A
308 318Right-handed alpha
Helix 15
15
A
319 331Right-handed alpha
Helix 16
16
A
333 348Right-handed alpha
Helix 17
17
A
352 360Right-handed alpha
Helix 18
18
A
361 368Right-handed alpha
Helix 19
19
A
374 390Right-handed alpha
Helix 20
20
A
398 409Right-handed alpha
Helix 21
21
A
413 428Right-handed alpha
Helix 22
22
A
431 441Right-handed alpha
Helix 23
23
A
442 455Right-handed alpha
Helix 24
24
A
457 472Right-handed alpha
Helix 25
25
A
477 488Right-handed alpha
Helix 26
26
A
490 497Right-handed alpha
Helix 27
27
A
503 518Right-handed alpha
Helix 28
28
A
519 522Right-handed 310
Helix 29
29
A
523 530Right-handed alpha
Helix 30
30
A
531 549Right-handed alpha
Helix 31
31
A
565 581Right-handed alpha
Helix 32
32
A
583 593Right-handed alpha
Helix 33
33
A
595 603Right-handed alpha
Helix 34
34
A
607 622Right-handed alpha
Helix 35
35
A
624 634Right-handed alpha
Helix 36
36
A
636 644Right-handed alpha
Helix 37
37
A
648 664Right-handed alpha
Helix 38
38
B
10 29Right-handed alpha
Helix 39
39
B
34 44Right-handed alpha
Helix 40
40
B
44 53Right-handed alpha
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There are no sheets in PDB entry 1T08
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il