Analysis of interatomic Contacts of Structural Units in PDB entry:
1TGO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1TGO entry

There is 1 chain in PDB entry 1TGO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1THR 773
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 1TGO. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
45 53Right-handed 310
Helix 2
2
A
90 102Right-handed alpha
Helix 3
3
A
116 123Right-handed alpha
Helix 4
4
A
187 201Right-handed alpha
Helix 5
5
A
211 213Right-handed 310
Helix 6
6
A
215 225Right-handed alpha
Helix 7
7
A
260 267Right-handed alpha
Helix 8
8
A
275 283Right-handed alpha
Helix 9
9
A
292 301Right-handed alpha
Helix 10
10
A
305 337Right-handed alpha
Helix 11
11
A
341 346Right-handed alpha
Helix 12
12
A
349 363Right-handed alpha
Helix 13
13
A
374 379Right-handed alpha
Helix 14
14
A
408 415Right-handed alpha
Helix 15
15
A
448 469Right-handed alpha
Helix 16
16
A
473 498Right-handed alpha
Helix 17
17
A
507 530Right-handed alpha
Helix 18
18
A
553 568Right-handed alpha
Helix 19
19
A
617 631Right-handed alpha
Helix 20
20
A
636 651Right-handed alpha
Helix 21
21
A
670 672Right-handed 310
Helix 22
22
A
679 689Right-handed alpha
Helix 23
23
A
717 719Right-handed 310
Helix 24
24
A
729 734Right-handed alpha
Helix 25
25
A
738 740Right-handed 310
Helix 26
26
A
742 748Right-handed alpha
Helix 27
27
A
752 754Right-handed 310
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There are 9 sheets in PDB entry 1TGO. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
25 31first strand
Strand 2
A
13 22anti-parallel
Strand 3
A
2 10anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
67 75first strand
Strand 2
A
78 86anti-parallel
Strand 3
A
37 42anti-parallel
Strand 4
A
106 110anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
55 58first strand
Strand 2
A
61 64anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
256 259first strand
Strand 2
A
205 208parallel
Strand 3
A
137 144parallel
Strand 4
A
157 164anti-parallel
Strand 5
A
167 172anti-parallel
Strand 6
A
181 183parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
240 243first strand
Strand 2
A
248 251anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
396 398first strand
Strand 2
A
585 590anti-parallel
Strand 3
A
593 597anti-parallel
Strand 4
A
603 606anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
577 583first strand
Strand 2
A
400 405anti-parallel
Strand 3
A
543 547anti-parallel
Strand 4
A
535 539anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
431 433first strand
Strand 2
A
440 442anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
662 665first strand
Strand 2
A
698 703anti-parallel
Strand 3
A
714 716anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il