Analysis of interatomic Contacts of Structural Units in PDB entry:
1UAE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UAE entry

There is 1 chain in PDB entry 1UAE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 1UAE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 34Right-handed alpha
Helix 2
2
A
48 59Right-handed alpha
Helix 3
3
A
84 89Right-handed alpha
Helix 4
4
A
92 104Right-handed 310
Helix 5
5
A
123 131Right-handed alpha
Helix 6
6
A
163 175Right-handed alpha
Helix 7
7
A
189 200Right-handed alpha
Helix 8
8
A
232 244Right-handed alpha
Helix 9
9
A
256 268Right-handed 310
Helix 10
10
A
304 316Right-handed 310
Helix 11
11
A
333 341Right-handed alpha
Helix 12
12
A
370 382Right-handed alpha
Helix 13
13
A
392 397Right-handed 310
Helix 14
14
A
402 409Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 1UAE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
412 416first strand
Strand 2
A
3 8anti-parallel
Strand 3
A
385 390anti-parallel
Strand 4
A
364 366parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 17first strand
Strand 2
A
248 252parallel
Strand 3
A
279 283anti-parallel
Strand 4
A
272 275anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 227first strand
Strand 2
A
39 42parallel
Strand 3
A
70 73anti-parallel
Strand 4
A
63 66anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 110first strand
Strand 2
A
142 146anti-parallel
Strand 3
A
135 139anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 157first strand
Strand 2
A
179 183parallel
Strand 3
A
212 216anti-parallel
Strand 4
A
204 206anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
320 324first strand
Strand 2
A
351 355anti-parallel
Strand 3
A
345 348anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il