Analysis of interatomic Contacts of Structural Units in PDB entry:
1UFO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UFO entry

There are 6 chains in PDB entry 1UFO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1ARG 238
B
 MSE 1ARG 238
C
 MSE 1ARG 238
D
 MSE 1ARG 238
E
 MSE 1ARG 238
F
 MSE 1ARG 238
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 1UFO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
36 43Right-handed alpha
Helix 2
2
A
47 50Right-handed 310
Helix 3
3
A
76 104Right-handed alpha
Helix 4
4
A
113 125Right-handed alpha
Helix 5
5
A
152 161Right-handed alpha
Helix 6
6
A
162 171Right-handed 310
Helix 7
7
A
187 199Right-handed alpha
Helix 8
8
A
200 202Right-handed 310
Helix 9
9
A
220 237Right-handed alpha
Helix 10
10
B
36 43Right-handed alpha
Helix 11
11
B
47 50Right-handed 310
Helix 12
12
B
76 104Right-handed alpha
Helix 13
13
B
113 125Right-handed alpha
Helix 14
14
B
152 161Right-handed alpha
Helix 15
15
B
162 170Right-handed 310
Helix 16
16
B
187 199Right-handed alpha
Helix 17
17
B
200 202Right-handed 310
Helix 18
18
B
220 236Right-handed alpha
Helix 19
19
C
36 43Right-handed alpha
Helix 20
20
C
47 50Right-handed 310
Helix 21
21
C
76 104Right-handed alpha
Helix 22
22
C
113 125Right-handed alpha
Helix 23
23
C
152 161Right-handed alpha
Helix 24
24
C
162 171Right-handed 310
Helix 25
25
C
187 199Right-handed alpha
Helix 26
26
C
200 202Right-handed 310
Helix 27
27
C
220 237Right-handed alpha
Helix 28
28
D
36 43Right-handed alpha
Helix 29
29
D
47 50Right-handed 310
Helix 30
30
D
76 104Right-handed alpha
Helix 31
31
D
113 125Right-handed alpha
Helix 32
32
D
152 161Right-handed alpha
Helix 33
33
D
162 171Right-handed 310
Helix 34
34
D
187 199Right-handed alpha
Helix 35
35
D
200 202Right-handed 310
Helix 36
36
D
220 237Right-handed alpha
Helix 37
37
E
36 43Right-handed alpha
Helix 38
38
E
47 50Right-handed 310
Helix 39
39
E
76 104Right-handed alpha
Helix 40
40
E
113 125Right-handed alpha
Helix 41
41
E
152 161Right-handed alpha
Helix 42
42
E
162 171Right-handed 310
Helix 43
43
E
187 199Right-handed alpha
Helix 44
44
E
200 202Right-handed 310
Helix 45
45
E
220 237Right-handed alpha
Helix 46
46
F
36 43Right-handed alpha
Helix 47
47
F
47 50Right-handed 310
Helix 48
48
F
76 104Right-handed alpha
Helix 49
49
F
113 125Right-handed alpha
Helix 50
50
F
152 161Right-handed alpha
Helix 51
51
F
162 171Right-handed 310
Helix 52
52
F
187 199Right-handed alpha
Helix 53
53
F
200 202Right-handed 310
Helix 54
54
F
220 237Right-handed alpha
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There are 3 sheets in PDB entry 1UFO. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 16 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 10first strand
Strand 2
A
13 20anti-parallel
Strand 3
A
52 56anti-parallel
Strand 4
A
25 30parallel
Strand 5
A
107 112parallel
Strand 6
A
132 135parallel
Strand 7
A
175 180parallel
Strand 8
A
207 212parallel
Strand 9
B
207 212anti-parallel
Strand 10
B
175 180parallel
Strand 11
B
132 135parallel
Strand 12
B
107 112parallel
Strand 13
B
25 30parallel
Strand 14
B
52 56parallel
Strand 15
B
13 19anti-parallel
Strand 16
B
4 10anti-parallel
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There are 16 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 10first strand
Strand 2
C
13 20anti-parallel
Strand 3
C
52 57anti-parallel
Strand 4
C
25 30parallel
Strand 5
C
107 112parallel
Strand 6
C
132 135parallel
Strand 7
C
175 180parallel
Strand 8
C
207 212parallel
Strand 9
D
207 213anti-parallel
Strand 10
D
175 180parallel
Strand 11
D
132 135parallel
Strand 12
D
107 112parallel
Strand 13
D
25 30parallel
Strand 14
D
52 57parallel
Strand 15
D
13 19anti-parallel
Strand 16
D
4 10anti-parallel
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There are 16 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3 10first strand
Strand 2
E
13 20anti-parallel
Strand 3
E
52 57anti-parallel
Strand 4
E
25 30parallel
Strand 5
E
107 112parallel
Strand 6
E
132 135parallel
Strand 7
E
175 180parallel
Strand 8
E
207 212parallel
Strand 9
F
207 212anti-parallel
Strand 10
F
175 180parallel
Strand 11
F
132 135parallel
Strand 12
F
107 112parallel
Strand 13
F
25 30parallel
Strand 14
F
52 56parallel
Strand 15
F
13 19anti-parallel
Strand 16
F
4 10anti-parallel
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