Analysis of interatomic Contacts of Structural Units in PDB entry:
1UG6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UG6 entry

There is 1 chain in PDB entry 1UG6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 4ALA 429
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 1UG6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 20Right-handed alpha
Helix 2
2
A
31 37Right-handed alpha
Helix 3
3
A
54 70Right-handed alpha
Helix 4
4
A
79 84Right-handed alpha
Helix 5
5
A
92 109Right-handed alpha
Helix 6
6
A
123 128Right-handed alpha
Helix 7
7
A
129 133Right-handed 310
Helix 8
8
A
134 153Right-handed alpha
Helix 9
9
A
164 174Right-handed alpha
Helix 10
10
A
184 209Right-handed alpha
Helix 11
11
A
227 239Right-handed alpha
Helix 12
12
A
239 247Right-handed alpha
Helix 13
13
A
267 273Right-handed alpha
Helix 14
14
A
315 330Right-handed alpha
Helix 15
15
A
355 376Right-handed alpha
Helix 16
16
A
392 399Right-handed 310
Helix 17
17
A
416 428Right-handed alpha
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There are 3 sheets in PDB entry 1UG6. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 13first strand
Strand 2
A
73 77parallel
Strand 3
A
112 118parallel
Strand 4
A
158 163parallel
Strand 5
A
213 219parallel
Strand 6
A
278 282parallel
Strand 7
A
334 339parallel
Strand 8
A
379 385parallel
Strand 9
A
9 13parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 224first strand
Strand 2
A
287 291parallel
Strand 3
A
298 300anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
404 406first strand
Strand 2
A
413 415anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il