Analysis of interatomic Contacts of Structural Units in PDB entry:
1UPL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UPL entry

There are 2 chains in PDB entry 1UPL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 13LYS 334
B
 SER 11LYS 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 1UPL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 27Right-handed alpha
Helix 2
2
A
35 55Right-handed alpha
Helix 3
3
A
68 78Right-handed alpha
Helix 4
4
A
78 86Right-handed alpha
Helix 5
5
A
87 90Right-handed 310
Helix 6
6
A
91 108Right-handed alpha
Helix 7
7
A
114 122Right-handed alpha
Helix 8
8
A
124 133Right-handed alpha
Helix 9
9
A
134 136Right-handed 310
Helix 10
10
A
139 151Right-handed alpha
Helix 11
11
A
153 162Right-handed alpha
Helix 12
12
A
163 167Right-handed 310
Helix 13
13
A
168 173Right-handed alpha
Helix 14
14
A
177 194Right-handed alpha
Helix 15
15
A
195 206Right-handed alpha
Helix 16
16
A
206 219Right-handed alpha
Helix 17
17
A
222 239Right-handed alpha
Helix 18
18
A
242 250Right-handed alpha
Helix 19
19
A
252 263Right-handed alpha
Helix 20
20
A
267 284Right-handed alpha
Helix 21
21
A
288 298Right-handed alpha
Helix 22
22
A
298 307Right-handed alpha
Helix 23
23
A
316 332Right-handed alpha
Helix 24
24
B
11 27Right-handed alpha
Helix 25
25
B
40 55Right-handed alpha
Helix 26
26
B
63 78Right-handed alpha
Helix 27
27
B
78 86Right-handed alpha
Helix 28
28
B
87 90Right-handed 310
Helix 29
29
B
91 107Right-handed alpha
Helix 30
30
B
114 122Right-handed alpha
Helix 31
31
B
124 133Right-handed alpha
Helix 32
32
B
134 136Right-handed 310
Helix 33
33
B
139 152Right-handed alpha
Helix 34
34
B
153 162Right-handed alpha
Helix 35
35
B
163 167Right-handed 310
Helix 36
36
B
168 173Right-handed alpha
Helix 37
37
B
177 194Right-handed alpha
Helix 38
38
B
195 218Right-handed alpha
Helix 39
39
B
222 239Right-handed alpha
Helix 40
40
B
242 250Right-handed alpha
Helix 41
41
B
252 263Right-handed alpha
Helix 42
42
B
267 284Right-handed alpha
Helix 43
43
B
288 298Right-handed alpha
Helix 44
44
B
298 308Right-handed alpha
Helix 45
45
B
318 332Right-handed alpha
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There are no sheets in PDB entry 1UPL
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