Analysis of interatomic Contacts of Structural Units in PDB entry:
1UU1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UU1 entry

There are 4 chains in PDB entry 1UU1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 6LYS 335
B
MET 1LYS 335
C
MET 1LYS 335
D
MET 1LYS 335
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 1UU1. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
34 44Right-handed alpha
Helix 2
2
A
46 52Right-handed 310
Helix 3
3
A
58 70Right-handed alpha
Helix 4
4
A
75 77Right-handed 310
Helix 5
5
A
84 96Right-handed alpha
Helix 6
6
A
107 117Right-handed alpha
Helix 7
7
A
156 166Right-handed alpha
Helix 8
8
A
176 181Right-handed alpha
Helix 9
9
A
184 190Right-handed 310
Helix 10
10
A
206 210Right-handed 310
Helix 11
11
A
217 228Right-handed alpha
Helix 12
12
A
234 247Right-handed alpha
Helix 13
13
A
247 273Right-handed alpha
Helix 14
14
A
290 303Right-handed alpha
Helix 15
15
A
320 333Right-handed alpha
Helix 16
16
B
1 8Right-handed alpha
Helix 17
17
B
34 45Right-handed alpha
Helix 18
18
B
46 52Right-handed 310
Helix 19
19
B
58 70Right-handed alpha
Helix 20
20
B
75 77Right-handed 310
Helix 21
21
B
84 96Right-handed alpha
Helix 22
22
B
107 116Right-handed alpha
Helix 23
23
B
156 166Right-handed alpha
Helix 24
24
B
176 180Right-handed 310
Helix 25
25
B
183 190Right-handed 310
Helix 26
26
B
217 228Right-handed alpha
Helix 27
27
B
234 247Right-handed alpha
Helix 28
28
B
247 273Right-handed alpha
Helix 29
29
B
289 303Right-handed alpha
Helix 30
30
B
320 333Right-handed alpha
Helix 31
31
C
34 45Right-handed alpha
Helix 32
32
C
48 52Right-handed 310
Helix 33
33
C
58 70Right-handed alpha
Helix 34
34
C
75 77Right-handed 310
Helix 35
35
C
83 96Right-handed alpha
Helix 36
36
C
107 117Right-handed alpha
Helix 37
37
C
156 166Right-handed alpha
Helix 38
38
C
176 181Right-handed alpha
Helix 39
39
C
184 190Right-handed 310
Helix 40
40
C
206 210Right-handed 310
Helix 41
41
C
217 228Right-handed alpha
Helix 42
42
C
234 247Right-handed alpha
Helix 43
43
C
247 272Right-handed alpha
Helix 44
44
C
289 302Right-handed alpha
Helix 45
45
C
320 333Right-handed alpha
Helix 46
46
D
34 45Right-handed alpha
Helix 47
47
D
46 52Right-handed 310
Helix 48
48
D
58 70Right-handed alpha
Helix 49
49
D
75 77Right-handed 310
Helix 50
50
D
84 94Right-handed alpha
Helix 51
51
D
106 117Right-handed alpha
Helix 52
52
D
156 166Right-handed alpha
Helix 53
53
D
176 181Right-handed alpha
Helix 54
54
D
184 190Right-handed 310
Helix 55
55
D
217 228Right-handed alpha
Helix 56
56
D
234 247Right-handed alpha
Helix 57
57
D
248 272Right-handed alpha
Helix 58
58
D
289 303Right-handed alpha
Helix 59
59
D
320 333Right-handed alpha
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There are 9 sheets in PDB entry 1UU1. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB, A, DB, C,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
22 24first strand
Strand 2
A
305 310parallel
Strand 3
A
313 317anti-parallel
Strand 4
A
283 287anti-parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
79 82first strand
Strand 2
A
212 216anti-parallel
Strand 3
A
194 199anti-parallel
Strand 4
A
169 173parallel
Strand 5
A
140 145parallel
Strand 6
A
98 101parallel
Strand 7
A
119 122parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
22 24first strand
Strand 2
B
305 309parallel
Strand 3
B
313 317anti-parallel
Strand 4
B
283 287anti-parallel
Strand 5
B
275 276anti-parallel
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There are 7 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
79 82first strand
Strand 2
B
212 216anti-parallel
Strand 3
B
194 199anti-parallel
Strand 4
B
169 173parallel
Strand 5
B
140 145parallel
Strand 6
B
98 101parallel
Strand 7
B
120 122parallel
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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
22 24first strand
Strand 2
C
305 310parallel
Strand 3
C
313 317anti-parallel
Strand 4
C
283 287anti-parallel
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There are 7 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
79 82first strand
Strand 2
C
212 216anti-parallel
Strand 3
C
194 199anti-parallel
Strand 4
C
169 173parallel
Strand 5
C
140 145parallel
Strand 6
C
98 101parallel
Strand 7
C
120 122parallel
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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
22 23first strand
Strand 2
D
305 306parallel
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There are 7 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
79 82first strand
Strand 2
D
212 216anti-parallel
Strand 3
D
194 199anti-parallel
Strand 4
D
169 173parallel
Strand 5
D
140 145parallel
Strand 6
D
98 101parallel
Strand 7
D
119 122parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
275 276first strand
Strand 2
D
283 287anti-parallel
Strand 3
D
313 317anti-parallel
Strand 4
D
308 310anti-parallel
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