Analysis of interatomic Contacts of Structural Units in PDB entry:
1UZK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UZK entry

There is 1 chain in PDB entry 1UZK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 1486ASP 1647
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 1UZK. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
1489 1493Right-handed 310
Helix 2
2
A
1558 1564Right-handed alpha
Helix 3
3
A
1582 1589Right-handed alpha
Helix 4
4
A
1608 1613Right-handed alpha
Helix 5
5
A
1614 1617Right-handed 310
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There are 5 sheets in PDB entry 1UZK. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1501 1505first strand
Strand 2
A
1508 1512anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1518 1519first strand
Strand 2
A
1526 1527anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1550 1557first strand
Strand 2
A
1532 1537anti-parallel
Strand 3
A
1569 1570anti-parallel
Strand 4
A
1575 1576anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1595 1597first strand
Strand 2
A
1604 1606anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1621 1624first strand
Strand 2
A
1629 1632anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il