Analysis of interatomic Contacts of Structural Units in PDB entry:
1V0X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1V0X entry

There is 1 chain in PDB entry 1V0X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 604
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 1V0X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
58 68Right-handed alpha
Helix 2
2
A
70 80Right-handed alpha
Helix 3
3
A
81 91Right-handed alpha
Helix 4
4
A
91 108Right-handed alpha
Helix 5
5
A
124 130Right-handed alpha
Helix 6
6
A
159 168Right-handed alpha
Helix 7
7
A
181 193Right-handed alpha
Helix 8
8
A
216 221Right-handed alpha
Helix 9
9
A
223 231Right-handed alpha
Helix 10
10
A
251 256Right-handed alpha
Helix 11
11
A
266 270Right-handed 310
Helix 12
12
A
275 280Right-handed 310
Helix 13
13
A
281 306Right-handed alpha
Helix 14
14
A
310 333Right-handed alpha
Helix 15
15
A
333 340Right-handed alpha
Helix 16
16
A
348 353Right-handed 310
Helix 17
17
A
364 371Right-handed alpha
Helix 18
18
A
373 377Right-handed 310
Helix 19
19
A
389 394Right-handed alpha
Helix 20
20
A
396 404Right-handed alpha
Helix 21
21
A
404 415Right-handed alpha
Helix 22
22
A
430 444Right-handed alpha
Helix 23
23
A
448 456Right-handed alpha
Helix 24
24
A
463 469Right-handed alpha
Helix 25
25
A
471 482Right-handed alpha
Helix 26
26
A
488 496Right-handed alpha
Helix 27
27
A
505 522Right-handed alpha
Helix 28
28
A
523 527Right-handed 310
Helix 29
29
A
532 537Right-handed 310
Helix 30
30
A
538 547Right-handed alpha
Helix 31
31
A
549 558Right-handed alpha
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There are 4 sheets in PDB entry 1V0X. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 34first strand
Strand 2
A
40 43anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 50first strand
Strand 2
A
56 57anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 243first strand
Strand 2
A
246 248anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
381 383first strand
Strand 2
A
386 388anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il