Analysis of interatomic Contacts of Structural Units in PDB entry:
1VZJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1VZJ entry

There are 10 chains in PDB entry 1VZJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 3PHE 28
B
ASP 1TYR 31
C
ASP 1SER 32
D
ASP 1SER 32
E
THR 2PHE 28
F
ASP 1GLN 34
G
ASP 1GLN 34
H
ASP 1SER 32
I
LEU 1PHE 15
J
LEU 1PHE 15
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 1VZJ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
5 28Right-handed alpha
Helix 2
2
B
1 13Right-handed alpha
Helix 3
3
B
13 31Right-handed alpha
Helix 4
4
C
1 32Right-handed alpha
Helix 5
5
D
1 32Right-handed alpha
Helix 6
6
E
7 28Right-handed alpha
Helix 7
7
F
1 13Right-handed alpha
Helix 8
8
F
13 34Right-handed alpha
Helix 9
9
G
1 30Right-handed alpha
Helix 10
10
H
1 31Right-handed alpha
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There are no sheets in PDB entry 1VZJ

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