Analysis of interatomic Contacts of Structural Units in PDB entry:
1WN7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WN7 entry

There is 1 chain in PDB entry 1WN7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1ARG 756
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 1WN7. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
47 52Right-handed alpha
Helix 2
2
A
92 102Right-handed alpha
Helix 3
3
A
115 124Right-handed alpha
Helix 4
4
A
186 202Right-handed alpha
Helix 5
5
A
214 226Right-handed alpha
Helix 6
6
A
260 268Right-handed alpha
Helix 7
7
A
274 284Right-handed alpha
Helix 8
8
A
291 300Right-handed alpha
Helix 9
9
A
304 338Right-handed alpha
Helix 10
10
A
340 346Right-handed alpha
Helix 11
11
A
348 364Right-handed alpha
Helix 12
12
A
373 382Right-handed alpha
Helix 13
13
A
407 416Right-handed alpha
Helix 14
14
A
447 468Right-handed alpha
Helix 15
15
A
472 491Right-handed alpha
Helix 16
16
A
492 499Right-handed alpha
Helix 17
17
A
506 533Right-handed alpha
Helix 18
18
A
552 571Right-handed alpha
Helix 19
19
A
618 631Right-handed alpha
Helix 20
20
A
635 648Right-handed alpha
Helix 21
21
A
657 661Right-handed 310
Helix 22
22
A
680 685Right-handed alpha
Helix 23
23
A
736 742Right-handed alpha
Helix 24
24
A
749 753Right-handed 310
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There are 6 sheets in PDB entry 1WN7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2 10first strand
Strand 2
A
13 21anti-parallel
Strand 3
A
26 31anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
68 75first strand
Strand 2
A
78 86anti-parallel
Strand 3
A
37 42anti-parallel
Strand 4
A
106 110anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
181 182first strand
Strand 2
A
167 172parallel
Strand 3
A
157 164anti-parallel
Strand 4
A
137 144anti-parallel
Strand 5
A
205 208parallel
Strand 6
A
256 259parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
240 244first strand
Strand 2
A
247 251anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
535 540first strand
Strand 2
A
543 547anti-parallel
Strand 3
A
396 405anti-parallel
Strand 4
A
577 588anti-parallel
Strand 5
A
594 598anti-parallel
Strand 6
A
601 603anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
431 433first strand
Strand 2
A
440 442anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il