Analysis of interatomic Contacts of Structural Units in PDB entry:
1WR6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WR6 entry

There are 8 chains in PDB entry 1WR6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 211GLN 300
B
LEU 215GLY 304
C
THR 212VAL 301
D
LEU 215ILE 302
E
MET 1ARG 72
F
MET 1LEU 73
G
MET 1ARG 72
H
MET 1ARG 74
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 1WR6. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
217 232Right-handed alpha
Helix 2
2
A
241 268Right-handed alpha
Helix 3
3
A
275 291Right-handed alpha
Helix 4
4
A
291 296Right-handed alpha
Helix 5
5
B
217 234Right-handed alpha
Helix 6
6
B
241 268Right-handed alpha
Helix 7
7
B
275 297Right-handed alpha
Helix 8
8
C
217 234Right-handed alpha
Helix 9
9
C
241 268Right-handed alpha
Helix 10
10
C
274 297Right-handed alpha
Helix 11
11
D
217 234Right-handed alpha
Helix 12
12
D
241 269Right-handed alpha
Helix 13
13
D
275 297Right-handed alpha
Helix 14
14
E
22 35Right-handed alpha
Helix 15
15
E
37 41Right-handed 310
Helix 16
16
F
22 35Right-handed alpha
Helix 17
17
F
37 41Right-handed 310
Helix 18
18
G
22 35Right-handed alpha
Helix 19
19
G
37 39Right-handed 310
Helix 20
20
G
55 60Right-handed 310
Helix 21
21
H
22 35Right-handed alpha
Helix 22
22
H
37 39Right-handed 310
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There are 4 sheets in PDB entry 1WR6. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
12 16first strand
Strand 2
E
2 6anti-parallel
Strand 3
E
66 69parallel
Strand 4
E
43 45anti-parallel
Strand 5
E
48 49anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
12 16first strand
Strand 2
F
2 7anti-parallel
Strand 3
F
66 69parallel
Strand 4
F
43 45anti-parallel
Strand 5
F
48 49anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
12 16first strand
Strand 2
G
2 6anti-parallel
Strand 3
G
66 71parallel
Strand 4
G
41 45anti-parallel
Strand 5
G
48 49anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
12 16first strand
Strand 2
H
2 6anti-parallel
Strand 3
H
66 71parallel
Strand 4
H
41 45anti-parallel
Strand 5
H
48 49anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il