Analysis of interatomic Contacts of Structural Units in PDB entry:
1WYI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WYI entry

There are 2 chains in PDB entry 1WYI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1GLN 248
B
 ALA 1GLN 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 1WYI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 30Right-handed alpha
Helix 2
2
A
44 46Right-handed 310
Helix 3
3
A
47 55Right-handed alpha
Helix 4
4
A
79 86Right-handed alpha
Helix 5
5
A
95 100Right-handed alpha
Helix 6
6
A
105 119Right-handed alpha
Helix 7
7
A
130 137Right-handed alpha
Helix 8
8
A
138 153Right-handed alpha
Helix 9
9
A
166 170Right-handed 310
Helix 10
10
A
177 196Right-handed alpha
Helix 11
11
A
197 204Right-handed alpha
Helix 12
12
A
216 223Right-handed alpha
Helix 13
13
A
232 237Right-handed 310
Helix 14
14
A
238 245Right-handed alpha
Helix 15
15
B
17 29Right-handed alpha
Helix 16
16
B
44 46Right-handed 310
Helix 17
17
B
47 55Right-handed alpha
Helix 18
18
B
79 86Right-handed alpha
Helix 19
19
B
95 101Right-handed alpha
Helix 20
20
B
105 119Right-handed alpha
Helix 21
21
B
130 135Right-handed alpha
Helix 22
22
B
138 152Right-handed alpha
Helix 23
23
B
156 158Right-handed 310
Helix 24
24
B
166 170Right-handed 310
Helix 25
25
B
177 196Right-handed alpha
Helix 26
26
B
197 202Right-handed alpha
Helix 27
27
B
216 223Right-handed alpha
Helix 28
28
B
232 236Right-handed 310
Helix 29
29
B
237 238Right-handed 310
Helix 30
30
B
239 244Right-handed alpha
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There are 2 sheets in PDB entry 1WYI. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 11first strand
Strand 2
A
37 42parallel
Strand 3
A
60 63parallel
Strand 4
A
90 93parallel
Strand 5
A
123 127parallel
Strand 6
A
160 164parallel
Strand 7
A
206 208parallel
Strand 8
A
228 231parallel
Strand 9
A
6 11parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 11first strand
Strand 2
B
37 42parallel
Strand 3
B
60 63parallel
Strand 4
B
90 93parallel
Strand 5
B
122 127parallel
Strand 6
B
160 164parallel
Strand 7
B
205 208parallel
Strand 8
B
228 231parallel
Strand 9
B
6 11parallel
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