Analysis of interatomic Contacts of Structural Units in PDB entry:
1XBC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1XBC entry

There is 1 chain in PDB entry 1XBC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 363GLU 636
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 1XBC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
366 368Right-handed 310
Helix 2
2
A
411 426Right-handed alpha
Helix 3
3
A
456 463Right-handed alpha
Helix 4
4
A
467 488Right-handed alpha
Helix 5
5
A
496 498Right-handed 310
Helix 6
6
A
535 539Right-handed 310
Helix 7
7
A
540 547Right-handed alpha
Helix 8
8
A
551 567Right-handed alpha
Helix 9
9
A
577 587Right-handed alpha
Helix 10
10
A
598 609Right-handed alpha
Helix 11
11
A
612 616Right-handed 310
Helix 12
12
A
618 635Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 1XBC. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 380first strand
Strand 2
A
383 391anti-parallel
Strand 3
A
396 403anti-parallel
Strand 4
A
444 449anti-parallel
Strand 5
A
435 440anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
454 455first strand
Strand 2
A
500 504anti-parallel
Strand 3
A
507 510anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
490 491first strand
Strand 2
A
517 518anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
525 527first strand
Strand 2
A
548 550anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il