Analysis of interatomic Contacts of Structural Units in PDB entry:
1XIU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1XIU entry

There are 4 chains in PDB entry 1XIU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 210GLU 430
B
ASN 209PRO 432
E
HIS 687SER 698
F
LYS 688GLY 697
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 1XIU. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
213 225Right-handed alpha
Helix 2
2
A
237 259Right-handed alpha
Helix 3
3
A
262 266Right-handed 310
Helix 4
4
A
267 291Right-handed alpha
Helix 5
5
A
292 294Right-handed 310
Helix 6
6
A
308 314Right-handed alpha
Helix 7
7
A
316 327Right-handed alpha
Helix 8
8
A
327 334Right-handed alpha
Helix 9
9
A
337 350Right-handed alpha
Helix 10
10
A
359 382Right-handed alpha
Helix 11
11
A
387 394Right-handed alpha
Helix 12
12
A
395 418Right-handed alpha
Helix 13
13
A
422 429Right-handed alpha
Helix 14
14
B
213 225Right-handed alpha
Helix 15
15
B
237 259Right-handed alpha
Helix 16
16
B
262 266Right-handed 310
Helix 17
17
B
267 291Right-handed alpha
Helix 18
18
B
292 294Right-handed 310
Helix 19
19
B
308 314Right-handed alpha
Helix 20
20
B
316 327Right-handed alpha
Helix 21
21
B
327 334Right-handed alpha
Helix 22
22
B
337 350Right-handed alpha
Helix 23
23
B
359 382Right-handed alpha
Helix 24
24
B
387 394Right-handed alpha
Helix 25
25
B
395 417Right-handed alpha
Helix 26
26
B
422 431Right-handed alpha
Helix 27
27
E
687 697Right-handed alpha
Helix 28
28
F
689 696Right-handed alpha
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There are 2 sheets in PDB entry 1XIU. Click on sheet of interest to get list of strands forming it: A, B,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
232 234first strand
Strand 2
A
304 307parallel
Strand 3
A
297 299anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
232 233first strand
Strand 2
B
304 307parallel
Strand 3
B
297 299anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il