Analysis of interatomic Contacts of Structural Units in PDB entry:
1XTQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1XTQ entry

There is 1 chain in PDB entry 1XTQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 3GLU 171
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 6 helices in PDB entry 1XTQ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
18 29Right-handed alpha
Helix 2
2
A
71 75Right-handed 310
Helix 3
3
A
89 108Right-handed alpha
Helix 4
4
A
123 127Right-handed 310
Helix 5
5
A
130 142Right-handed alpha
Helix 6
6
A
152 171Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 1XTQ.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
41 49first strand
Strand 2
A
52 60anti-parallel
Strand 3
A
5 13parallel
Strand 4
A
80 86parallel
Strand 5
A
114 119parallel
Strand 6
A
144 147parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il