Analysis of interatomic Contacts of Structural Units in PDB entry:
2AE0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2AE0 entry

There is 1 chain in PDB entry 2AE0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
SER 3PRO 337
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 2AE0. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
X
35 50Right-handed alpha
Helix 2
2
X
50 70Right-handed alpha
Helix 3
3
X
73 79Right-handed 310
Helix 4
4
X
127 130Right-handed 310
Helix 5
5
X
132 138Right-handed alpha
Helix 6
6
X
141 144Right-handed 310
Helix 7
7
X
152 163Right-handed alpha
Helix 8
8
X
190 198Right-handed alpha
Helix 9
9
X
202 205Right-handed 310
Helix 10
10
X
207 217Right-handed alpha
Helix 11
11
X
219 228Right-handed alpha
Helix 12
12
X
314 322Right-handed alpha
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There are 2 sheets in PDB entry 2AE0. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
X
21 24first strand
Strand 2
X
82 87anti-parallel
Strand 3
X
326 335anti-parallel
Strand 4
X
270 278anti-parallel
Strand 5
X
284 297anti-parallel
Strand 6
X
257 259parallel
Strand 7
X
307 313anti-parallel
Strand 8
X
96 103parallel
Strand 9
X
326 335anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
X
118 121first strand
Strand 2
X
146 150anti-parallel
Strand 3
X
105 109anti-parallel
Strand 4
X
165 168parallel
Strand 5
X
176 183anti-parallel
Strand 6
X
234 239anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il