Analysis of interatomic Contacts of Structural Units in PDB entry:
2BC9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BC9 entry

There is 1 chain in PDB entry 2BC9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 2ASP 308
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 2BC9. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
24 32Right-handed alpha
Helix 2
2
A
50 58Right-handed alpha
Helix 3
3
A
108 123Right-handed alpha
Helix 4
4
A
135 155Right-handed alpha
Helix 5
5
A
197 207Right-handed alpha
Helix 6
6
A
213 219Right-handed alpha
Helix 7
7
A
219 230Right-handed alpha
Helix 8
8
A
246 250Right-handed 310
Helix 9
9
A
259 277Right-handed alpha
Helix 10
10
A
289 304Right-handed alpha
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There are 2 sheets in PDB entry 2BC9. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
21 23first strand
Strand 2
A
11 16anti-parallel
Strand 3
A
78 84anti-parallel
Strand 4
A
92 98anti-parallel
Strand 5
A
38 44parallel
Strand 6
A
125 131parallel
Strand 7
A
177 183parallel
Strand 8
A
233 237parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
190 191first strand
Strand 2
A
194 195anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il