Analysis of interatomic Contacts of Structural Units in PDB entry:
2BU6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2BU6 entry

There is 1 chain in PDB entry 2BU6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 6VAL 385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 2BU6. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
7 16Right-handed alpha
Helix 2
2
A
24 30Right-handed alpha
Helix 3
3
A
37 61Right-handed alpha
Helix 4
4
A
64 69Right-handed alpha
Helix 5
5
A
70 89Right-handed alpha
Helix 6
6
A
90 92Right-handed 310
Helix 7
7
A
101 115Right-handed alpha
Helix 8
8
A
117 134Right-handed alpha
Helix 9
9
A
136 168Right-handed alpha
Helix 10
10
A
189 209Right-handed alpha
Helix 11
11
A
233 256Right-handed alpha
Helix 12
12
A
288 296Right-handed alpha
Helix 13
13
A
320 332Right-handed alpha
Helix 14
14
A
367 372Right-handed alpha
Helix 15
15
A
373 375Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 2BU6. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
184 188first strand
Strand 2
A
229 232anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
214 220first strand
Strand 2
A
265 271parallel
Strand 3
A
275 285anti-parallel
Strand 4
A
344 353anti-parallel
Strand 5
A
335 341anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il