Analysis of interatomic Contacts of Structural Units in PDB entry:
2C6F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2C6F entry

There are 2 chains in PDB entry 2C6F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 1ASP 612
B
ASP 2ASP 612
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 2C6F. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
2 6Right-handed 310
Helix 2
2
A
13 44Right-handed alpha
Helix 3
3
A
47 77Right-handed alpha
Helix 4
4
A
85 96Right-handed alpha
Helix 5
5
A
98 103Right-handed 310
Helix 6
6
A
104 125Right-handed alpha
Helix 7
7
A
141 150Right-handed alpha
Helix 8
8
A
152 188Right-handed alpha
Helix 9
9
A
193 200Right-handed alpha
Helix 10
10
A
201 203Right-handed 310
Helix 11
11
A
206 238Right-handed alpha
Helix 12
12
A
261 263Right-handed 310
Helix 13
13
A
264 269Right-handed alpha
Helix 14
14
A
279 287Right-handed alpha
Helix 15
15
A
289 304Right-handed alpha
Helix 16
16
A
310 317Right-handed alpha
Helix 17
17
A
352 373Right-handed alpha
Helix 18
18
A
376 380Right-handed 310
Helix 19
19
A
384 401Right-handed alpha
Helix 20
20
A
417 433Right-handed alpha
Helix 21
21
A
434 451Right-handed alpha
Helix 22
22
A
455 457Right-handed 310
Helix 23
23
A
458 472Right-handed alpha
Helix 24
24
A
484 489Right-handed 310
Helix 25
25
A
498 520Right-handed alpha
Helix 26
26
A
524 528Right-handed 310
Helix 27
27
A
533 545Right-handed alpha
Helix 28
28
A
551 561Right-handed alpha
Helix 29
29
A
567 574Right-handed alpha
Helix 30
30
A
574 588Right-handed alpha
Helix 31
31
B
14 44Right-handed alpha
Helix 32
32
B
48 76Right-handed alpha
Helix 33
33
B
85 96Right-handed alpha
Helix 34
34
B
98 103Right-handed 310
Helix 35
35
B
104 123Right-handed alpha
Helix 36
36
B
141 150Right-handed alpha
Helix 37
37
B
152 169Right-handed alpha
Helix 38
38
B
171 188Right-handed alpha
Helix 39
39
B
193 200Right-handed alpha
Helix 40
40
B
201 203Right-handed 310
Helix 41
41
B
206 238Right-handed alpha
Helix 42
42
B
261 268Right-handed 310
Helix 43
43
B
279 285Right-handed alpha
Helix 44
44
B
289 304Right-handed alpha
Helix 45
45
B
310 317Right-handed alpha
Helix 46
46
B
352 372Right-handed alpha
Helix 47
47
B
376 380Right-handed 310
Helix 48
48
B
384 401Right-handed alpha
Helix 49
49
B
401 407Right-handed alpha
Helix 50
50
B
418 432Right-handed alpha
Helix 51
51
B
434 451Right-handed alpha
Helix 52
52
B
455 459Right-handed 310
Helix 53
53
B
460 471Right-handed alpha
Helix 54
54
B
484 489Right-handed 310
Helix 55
55
B
498 519Right-handed alpha
Helix 56
56
B
524 528Right-handed 310
Helix 57
57
B
533 545Right-handed alpha
Helix 58
58
B
551 560Right-handed alpha
Helix 59
59
B
567 589Right-handed alpha
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There are 5 sheets in PDB entry 2C6F. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
126 127first strand
Strand 2
A
137 138anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
248 249first strand
Strand 2
A
473 474parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
333 336first strand
Strand 2
A
343 346anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
248 249first strand
Strand 2
B
473 474parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
333 336first strand
Strand 2
B
343 346anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il