Analysis of interatomic Contacts of Structural Units in PDB entry:
2CE8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2CE8 entry

There are 6 chains in PDB entry 2CE8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 434TYR 770
B
ASP 434TYR 770
C
ASP 434TYR 770
D
ASP 434TYR 770
X
MET 1ALA 9
Y
MET 1ALA 9
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 2CE8. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
X
3 9Right-handed alpha
Helix 2
2
Y
3 9Right-handed alpha
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There are 30 sheets in PDB entry 2CE8. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, BA, BB, BC, BD, BE, BF, BG, CA, CB, CC, CD, CE, CF, CG, CH, A, DB, C, DD, DE, DF, G,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
436 444first strand
Strand 2
B
436 444anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
456 458first strand
Strand 2
A
447 450anti-parallel
Strand 3
A
691 694anti-parallel
Strand 4
A
681 685anti-parallel
Strand 5
A
671 676anti-parallel
Strand 6
A
660 665anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
474 481first strand
Strand 2
A
763 769anti-parallel
Strand 3
A
753 758anti-parallel
Strand 4
A
742 747anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
489 492first strand
Strand 2
A
498 502anti-parallel
Strand 3
A
506 511anti-parallel
Strand 4
A
522 525anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
533 538first strand
Strand 2
A
544 549anti-parallel
Strand 3
A
553 558anti-parallel
Strand 4
A
565 571anti-parallel
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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
577 582first strand
Strand 2
A
588 593anti-parallel
Strand 3
A
598 602anti-parallel
Strand 4
A
607 612anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
619 624first strand
Strand 2
A
630 635anti-parallel
Strand 3
A
639 644anti-parallel
Strand 4
A
650 655anti-parallel
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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
701 706first strand
Strand 2
A
712 717anti-parallel
Strand 3
A
721 726anti-parallel
Strand 4
A
732 737anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
456 458first strand
Strand 2
B
447 450anti-parallel
Strand 3
B
691 694anti-parallel
Strand 4
B
681 685anti-parallel
Strand 5
B
671 676anti-parallel
Strand 6
B
660 665anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
474 481first strand
Strand 2
B
763 769anti-parallel
Strand 3
B
753 758anti-parallel
Strand 4
B
742 747anti-parallel
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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
489 492first strand
Strand 2
B
498 502anti-parallel
Strand 3
B
506 511anti-parallel
Strand 4
B
522 525anti-parallel
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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
533 538first strand
Strand 2
B
544 549anti-parallel
Strand 3
B
553 558anti-parallel
Strand 4
B
565 571anti-parallel
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There are 4 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
577 582first strand
Strand 2
B
588 593anti-parallel
Strand 3
B
598 602anti-parallel
Strand 4
B
607 612anti-parallel
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There are 4 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
619 624first strand
Strand 2
B
630 635anti-parallel
Strand 3
B
639 644anti-parallel
Strand 4
B
650 655anti-parallel
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There are 4 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
701 706first strand
Strand 2
B
712 717anti-parallel
Strand 3
B
721 726anti-parallel
Strand 4
B
732 737anti-parallel
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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
436 444first strand
Strand 2
D
436 444anti-parallel
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There are 6 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
456 458first strand
Strand 2
C
447 450anti-parallel
Strand 3
C
691 694anti-parallel
Strand 4
C
681 685anti-parallel
Strand 5
C
671 676anti-parallel
Strand 6
C
660 665anti-parallel
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There are 4 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
474 481first strand
Strand 2
C
763 769anti-parallel
Strand 3
C
753 758anti-parallel
Strand 4
C
742 747anti-parallel
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There are 4 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
489 492first strand
Strand 2
C
498 502anti-parallel
Strand 3
C
506 511anti-parallel
Strand 4
C
522 525anti-parallel
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There are 4 strands in CE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
533 538first strand
Strand 2
C
544 549anti-parallel
Strand 3
C
553 558anti-parallel
Strand 4
C
565 571anti-parallel
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There are 4 strands in CF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
577 582first strand
Strand 2
C
588 593anti-parallel
Strand 3
C
598 602anti-parallel
Strand 4
C
607 612anti-parallel
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There are 4 strands in CG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
619 624first strand
Strand 2
C
630 635anti-parallel
Strand 3
C
639 644anti-parallel
Strand 4
C
650 655anti-parallel
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There are 4 strands in CH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
701 706first strand
Strand 2
C
712 717anti-parallel
Strand 3
C
721 726anti-parallel
Strand 4
C
732 737anti-parallel
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There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
456 458first strand
Strand 2
D
447 450anti-parallel
Strand 3
D
691 694anti-parallel
Strand 4
D
681 685anti-parallel
Strand 5
D
671 676anti-parallel
Strand 6
D
660 665anti-parallel
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There are 4 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
474 481first strand
Strand 2
D
763 769anti-parallel
Strand 3
D
753 758anti-parallel
Strand 4
D
742 747anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
489 492first strand
Strand 2
D
498 502anti-parallel
Strand 3
D
506 511anti-parallel
Strand 4
D
522 525anti-parallel
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There are 4 strands in DD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
533 538first strand
Strand 2
D
544 549anti-parallel
Strand 3
D
553 558anti-parallel
Strand 4
D
565 571anti-parallel
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There are 4 strands in DE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
577 582first strand
Strand 2
D
588 593anti-parallel
Strand 3
D
598 602anti-parallel
Strand 4
D
607 612anti-parallel
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There are 4 strands in DF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
619 624first strand
Strand 2
D
630 635anti-parallel
Strand 3
D
639 644anti-parallel
Strand 4
D
650 655anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
701 706first strand
Strand 2
D
712 717anti-parallel
Strand 3
D
721 726anti-parallel
Strand 4
D
732 737anti-parallel
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