Analysis of interatomic Contacts of Structural Units in PDB entry:
2D1X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2D1X entry

There are 6 chains in PDB entry 2D1X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 2GLN 61
B
ASP 3GLN 61
C
GLY -4GLN 61
D
ASP 3GLN 61
P
LYS 3GLY 11
Q
LYS 3GLY 11
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 2D1X


There are 4 sheets in PDB entry 2D1X. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
48 53first strand
Strand 2
A
40 45anti-parallel
Strand 3
A
29 34anti-parallel
Strand 4
A
8 10anti-parallel
Strand 5
A
57 59anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
48 53first strand
Strand 2
B
40 45anti-parallel
Strand 3
B
29 34anti-parallel
Strand 4
B
8 10anti-parallel
Strand 5
B
57 59anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
48 53first strand
Strand 2
C
40 45anti-parallel
Strand 3
C
29 35anti-parallel
Strand 4
C
8 10anti-parallel
Strand 5
C
57 59anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
48 53first strand
Strand 2
D
40 45anti-parallel
Strand 3
D
29 34anti-parallel
Strand 4
D
8 10anti-parallel
Strand 5
D
57 59anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il