Analysis of interatomic Contacts of Structural Units in PDB entry:
2DGZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2DGZ entry

There is 1 chain in PDB entry 2DGZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 1133GLY 1245
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 6 helices in PDB entry 2DGZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
1146 1171Right-handed alpha
Helix 2
2
A
1174 1179Right-handed alpha
Helix 3
3
A
1180 1191Right-handed alpha
Helix 4
4
A
1194 1201Right-handed alpha
Helix 5
5
A
1207 1211Right-handed 310
Helix 6
6
A
1212 1225Right-handed alpha
Back to top of page
There are no sheets in PDB entry 2DGZ

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il