Analysis of interatomic Contacts of Structural Units in PDB entry:
2E2J

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2E2J entry

There are 13 chains in PDB entry 2E2J (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
R	A 2	G 10
T	T 1	T 27
N	C 2	A 14
A	GLY 3	ILE 1445
B	ASP 20	ARG 1222
C	SER 2	ASP 268
E	ASP 2	MET 215
F	LEU 69	ASP 154
H	SER 2	ARG 146
I	THR 2	GLN 120
J	MET 1	PRO 65
K	MET 1	LEU 114
L	ALA 25	ARG 70

There are128 helices in PDB entry 2E2J. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	23	31	Right-handed alpha
Helix 2	2	A	92	94	Right-handed 310
Helix 3	3	A	95	104	Right-handed alpha
Helix 4	4	A	130	139	Right-handed alpha
Helix 5	5	A	140	142	Right-handed 310
Helix 6	6	A	203	213	Right-handed alpha
Helix 7	7	A	215	222	Right-handed alpha
Helix 8	8	A	230	235	Right-handed alpha
Helix 9	9	A	243	247	Right-handed 310
Helix 10	10	A	260	274	Right-handed alpha
Helix 11	11	A	275	277	Right-handed 310
Helix 12	12	A	289	303	Right-handed alpha
Helix 13	13	A	324	330	Right-handed alpha
Helix 14	14	A	368	372	Right-handed alpha
Helix 15	15	A	384	395	Right-handed alpha
Helix 16	16	A	471	473	Right-handed 310
Helix 17	17	A	474	479	Right-handed alpha
Helix 18	18	A	494	503	Right-handed alpha
Helix 19	19	A	507	511	Right-handed 310
Helix 20	20	A	513	517	Right-handed 310
Helix 21	21	A	524	536	Right-handed alpha
Helix 22	22	A	543	553	Right-handed alpha
Helix 23	23	A	574	579	Right-handed alpha
Helix 24	24	A	618	623	Right-handed alpha
Helix 25	25	A	628	638	Right-handed alpha
Helix 26	26	A	638	661	Right-handed alpha
Helix 27	27	A	665	669	Right-handed 310
Helix 28	28	A	672	698	Right-handed alpha
Helix 29	29	A	711	737	Right-handed alpha
Helix 30	30	A	741	750	Right-handed alpha
Helix 31	31	A	754	763	Right-handed alpha
Helix 32	32	A	793	798	Right-handed alpha
Helix 33	33	A	809	846	Right-handed alpha
Helix 34	34	A	867	871	Right-handed 310
Helix 35	35	A	874	876	Right-handed 310
Helix 36	36	A	889	898	Right-handed alpha
Helix 37	37	A	925	947	Right-handed alpha
Helix 38	38	A	959	969	Right-handed alpha
Helix 39	39	A	982	994	Right-handed alpha
Helix 40	40	A	995	997	Right-handed 310
Helix 41	41	A	1004	1026	Right-handed alpha
Helix 42	42	A	1027	1034	Right-handed alpha
Helix 43	43	A	1038	1057	Right-handed alpha
Helix 44	44	A	1063	1078	Right-handed alpha
Helix 45	45	A	1097	1107	Right-handed alpha
Helix 46	46	A	1127	1137	Right-handed alpha
Helix 47	47	A	1143	1145	Right-handed 310
Helix 48	48	A	1167	1172	Right-handed alpha
Helix 49	49	A	1200	1205	Right-handed alpha
Helix 50	50	A	1208	1221	Right-handed alpha
Helix 51	51	A	1260	1269	Right-handed alpha
Helix 52	52	A	1312	1316	Right-handed 310
Helix 53	53	A	1331	1339	Right-handed alpha
Helix 54	54	A	1340	1360	Right-handed alpha
Helix 55	55	A	1364	1377	Right-handed alpha
Helix 56	56	A	1388	1392	Right-handed 310
Helix 57	57	A	1395	1401	Right-handed alpha
Helix 58	58	A	1404	1415	Right-handed alpha
Helix 59	59	A	1423	1430	Right-handed alpha
Helix 60	60	A	1436	1440	Right-handed 310
Helix 61	61	B	28	40	Right-handed alpha
Helix 62	62	B	44	57	Right-handed alpha
Helix 63	63	B	57	63	Right-handed alpha
Helix 64	64	B	113	120	Right-handed alpha
Helix 65	65	B	179	184	Right-handed 310
Helix 66	66	B	185	192	Right-handed alpha
Helix 67	67	B	282	290	Right-handed alpha
Helix 68	68	B	296	302	Right-handed alpha
Helix 69	69	B	307	322	Right-handed alpha
Helix 70	70	B	326	333	Right-handed alpha
Helix 71	71	B	345	359	Right-handed alpha
Helix 72	72	B	371	390	Right-handed alpha
Helix 73	73	B	400	402	Right-handed 310
Helix 74	74	B	408	434	Right-handed alpha
Helix 75	75	B	450	463	Right-handed alpha
Helix 76	76	B	473	477	Right-handed 310
Helix 77	77	B	487	495	Right-handed alpha
Helix 78	78	B	515	519	Right-handed 310
Helix 79	79	B	551	560	Right-handed alpha
Helix 80	80	B	570	574	Right-handed 310
Helix 81	81	B	592	605	Right-handed alpha
Helix 82	82	B	654	667	Right-handed alpha
Helix 83	83	B	680	687	Right-handed alpha
Helix 84	84	B	696	701	Right-handed 310
Helix 85	85	B	744	749	Right-handed 310
Helix 86	86	B	752	756	Right-handed 310
Helix 87	87	B	758	762	Right-handed 310
Helix 88	88	B	763	775	Right-handed alpha
Helix 89	89	B	782	786	Right-handed 310
Helix 90	90	B	809	813	Right-handed 310
Helix 91	91	B	843	849	Right-handed alpha
Helix 92	92	B	1022	1039	Right-handed alpha
Helix 93	93	B	1051	1062	Right-handed alpha
Helix 94	94	B	1098	1102	Right-handed 310
Helix 95	95	B	1121	1125	Right-handed 310
Helix 96	96	B	1131	1142	Right-handed alpha
Helix 97	97	B	1143	1150	Right-handed alpha
Helix 98	98	B	1197	1210	Right-handed alpha
Helix 99	99	C	26	40	Right-handed alpha
Helix 100	100	C	59	70	Right-handed alpha
Helix 101	101	C	76	80	Right-handed 310
Helix 102	102	C	116	118	Right-handed 310
Helix 103	103	C	196	201	Right-handed alpha
Helix 104	104	C	204	208	Right-handed 310
Helix 105	105	C	239	264	Right-handed alpha
Helix 106	106	E	6	27	Right-handed alpha
Helix 107	107	E	31	36	Right-handed alpha
Helix 108	108	E	38	47	Right-handed alpha
Helix 109	109	E	67	72	Right-handed alpha
Helix 110	110	E	92	104	Right-handed alpha
Helix 111	111	E	117	122	Right-handed alpha
Helix 112	112	E	137	141	Right-handed 310
Helix 113	113	E	143	147	Right-handed 310
Helix 114	114	E	157	168	Right-handed alpha
Helix 115	115	E	171	175	Right-handed 310
Helix 116	116	E	182	189	Right-handed alpha
Helix 117	117	F	86	103	Right-handed alpha
Helix 118	118	F	116	127	Right-handed alpha
Helix 119	119	H	83	87	Right-handed 310
Helix 120	120	H	129	133	Right-handed 310
Helix 121	121	J	14	16	Right-handed 310
Helix 122	122	J	17	27	Right-handed alpha
Helix 123	123	J	31	39	Right-handed alpha
Helix 124	124	J	43	52	Right-handed alpha
Helix 125	125	J	56	63	Right-handed alpha
Helix 126	126	K	5	10	Right-handed 310
Helix 127	127	K	39	50	Right-handed alpha
Helix 128	128	K	82	112	Right-handed alpha

There are 42 sheets in PDB entry 2E2J. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1418	1419	first strand
Strand 2	A	16	19	anti-parallel
Strand 3	B	1214	1217	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	82	90	first strand
Strand 2	A	236	241	anti-parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	175	177	first strand
Strand 2	A	180	182	anti-parallel
Strand 3	A	201	202	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	343	345	first strand
Strand 2	B	1128	1130	anti-parallel

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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1104	1106	first strand
Strand 2	A	348	355	anti-parallel
Strand 3	A	486	490	anti-parallel
Strand 4	A	441	445	anti-parallel
Strand 5	A	455	463	anti-parallel
Strand 6	A	363	367	parallel
Strand 7	A	468	470	anti-parallel
Strand 8	A	348	355	parallel

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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	412	413	first strand
Strand 2	A	402	406	anti-parallel
Strand 3	A	431	434	anti-parallel

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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	540	542	first strand
Strand 2	A	570	573	anti-parallel
Strand 3	A	565	566	anti-parallel

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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	587	589	first strand
Strand 2	A	606	608	anti-parallel
Strand 3	A	612	614	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	766	767	first strand
Strand 2	A	799	800	anti-parallel

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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	849	850	first strand
Strand 2	A	856	857	anti-parallel
Strand 3	A	863	865	anti-parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	878	882	first strand
Strand 2	A	953	957	anti-parallel

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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1282	1287	first strand
Strand 2	A	1303	1308	anti-parallel
Strand 3	A	1116	1119	anti-parallel
Strand 4	A	1328	1329	anti-parallel

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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1225	1228	first strand
Strand 2	A	1237	1241	anti-parallel
Strand 3	A	1191	1197	anti-parallel
Strand 4	A	1147	1154	anti-parallel
Strand 5	I	42	44	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1290	1292	first strand
Strand 2	A	1298	1300	anti-parallel

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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1442	1444	first strand
Strand 2	F	133	137	anti-parallel
Strand 3	F	143	147	anti-parallel

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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	97	first strand
Strand 2	B	125	133	anti-parallel
Strand 3	B	165	171	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	101	103	first strand
Strand 2	B	109	111	anti-parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	203	205	first strand
Strand 2	B	208	210	anti-parallel

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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	404	407	first strand
Strand 2	B	214	218	anti-parallel
Strand 3	B	497	499	parallel
Strand 4	B	537	538	anti-parallel

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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	223	227	first strand
Strand 2	B	234	242	anti-parallel
Strand 3	B	252	259	anti-parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	270	272	first strand
Strand 2	B	279	281	anti-parallel

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There are 3 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	544	545	first strand
Strand 2	B	633	635	anti-parallel
Strand 3	B	693	694	anti-parallel

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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	586	590	first strand
Strand 2	B	578	582	anti-parallel
Strand 3	B	623	627	parallel
Strand 4	B	614	618	anti-parallel

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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	640	641	first strand
Strand 2	B	650	651	anti-parallel

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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	703	704	first strand
Strand 2	B	740	741	parallel

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There are 5 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	793	796	first strand
Strand 2	B	853	861	anti-parallel
Strand 3	B	961	972	anti-parallel
Strand 4	B	947	957	anti-parallel
Strand 5	B	904	905	anti-parallel

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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	804	805	first strand
Strand 2	B	1042	1043	parallel

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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1069	1070	first strand
Strand 2	B	1085	1089	anti-parallel
Strand 3	B	824	827	anti-parallel
Strand 4	B	1010	1012	parallel
Strand 5	B	839	842	anti-parallel
Strand 6	B	987	994	parallel
Strand 7	B	979	981	anti-parallel
Strand 8	B	1093	1094	anti-parallel

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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	873	874	first strand
Strand 2	B	914	917	anti-parallel
Strand 3	B	934	936	anti-parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1001	1002	first strand
Strand 2	B	1072	1073	anti-parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1158	1163	first strand
Strand 2	B	1191	1196	anti-parallel

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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	7	13	first strand
Strand 2	C	17	23	anti-parallel
Strand 3	C	229	233	anti-parallel
Strand 4	C	176	179	anti-parallel

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There are 5 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	119	120	first strand
Strand 2	C	97	104	anti-parallel
Strand 3	C	152	162	anti-parallel
Strand 4	C	43	54	anti-parallel
Strand 5	L	66	68	anti-parallel

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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	111	114	first strand
Strand 2	C	143	147	anti-parallel

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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	61	62	first strand
Strand 2	E	78	82	anti-parallel
Strand 3	E	107	111	parallel
Strand 4	E	131	134	parallel

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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	87	88	first strand
Strand 2	E	115	116	parallel

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There are 3 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	177	178	first strand
Strand 2	E	207	214	parallel
Strand 3	E	196	201	anti-parallel

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There are 9 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	95	98	first strand
Strand 2	H	141	145	anti-parallel
Strand 3	H	55	58	anti-parallel
Strand 4	H	7	16	anti-parallel
Strand 5	H	23	30	anti-parallel
Strand 6	H	37	43	anti-parallel
Strand 7	H	121	127	anti-parallel
Strand 8	H	112	118	anti-parallel
Strand 9	H	100	106	anti-parallel

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There are 2 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	6	7	first strand
Strand 2	I	12	13	anti-parallel

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There are 3 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	15	19	first strand
Strand 2	I	24	28	anti-parallel
Strand 3	I	35	37	anti-parallel

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There are 2 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	100	102	first strand
Strand 2	I	109	111	anti-parallel

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There are 4 strands in AP sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	19	23	first strand
Strand 2	K	30	36	anti-parallel
Strand 3	K	70	77	anti-parallel
Strand 4	K	56	63	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2E2J

Analysis of interatomic Contacts of Structural Units in PDB entry:
2E2J