Analysis of interatomic Contacts of Structural Units in PDB entry:
2E89


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2E89 entry

There are 4 chains in PDB entry 2E89 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 317
B
 MET 1SER 314
C
 MET 1SER 314
D
 MET 1PHE 313
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 2E89. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 19Right-handed alpha
Helix 2
2
A
34 48Right-handed alpha
Helix 3
3
A
67 83Right-handed alpha
Helix 4
4
A
93 97Right-handed 310
Helix 5
5
A
104 125Right-handed alpha
Helix 6
6
A
134 149Right-handed alpha
Helix 7
7
A
151 157Right-handed alpha
Helix 8
8
A
173 184Right-handed alpha
Helix 9
9
A
199 208Right-handed alpha
Helix 10
10
A
208 213Right-handed alpha
Helix 11
11
A
218 247Right-handed alpha
Helix 12
12
A
256 260Right-handed alpha
Helix 13
13
A
263 276Right-handed alpha
Helix 14
14
A
279 289Right-handed alpha
Helix 15
15
B
2 19Right-handed alpha
Helix 16
16
B
34 47Right-handed alpha
Helix 17
17
B
68 83Right-handed alpha
Helix 18
18
B
93 100Right-handed alpha
Helix 19
19
B
104 124Right-handed alpha
Helix 20
20
B
134 149Right-handed alpha
Helix 21
21
B
151 157Right-handed alpha
Helix 22
22
B
173 184Right-handed alpha
Helix 23
23
B
199 207Right-handed alpha
Helix 24
24
B
207 213Right-handed alpha
Helix 25
25
B
218 249Right-handed alpha
Helix 26
26
B
255 260Right-handed alpha
Helix 27
27
B
263 276Right-handed alpha
Helix 28
28
B
279 289Right-handed alpha
Helix 29
29
C
2 19Right-handed alpha
Helix 30
30
C
34 48Right-handed alpha
Helix 31
31
C
49 52Right-handed 310
Helix 32
32
C
68 84Right-handed alpha
Helix 33
33
C
93 101Right-handed alpha
Helix 34
34
C
104 125Right-handed alpha
Helix 35
35
C
134 149Right-handed alpha
Helix 36
36
C
151 157Right-handed alpha
Helix 37
37
C
173 184Right-handed alpha
Helix 38
38
C
192 196Right-handed 310
Helix 39
39
C
199 208Right-handed alpha
Helix 40
40
C
208 213Right-handed alpha
Helix 41
41
C
218 248Right-handed alpha
Helix 42
42
C
256 260Right-handed alpha
Helix 43
43
C
263 276Right-handed alpha
Helix 44
44
C
279 289Right-handed alpha
Helix 45
45
D
2 19Right-handed alpha
Helix 46
46
D
34 47Right-handed alpha
Helix 47
47
D
67 84Right-handed alpha
Helix 48
48
D
94 100Right-handed alpha
Helix 49
49
D
104 125Right-handed alpha
Helix 50
50
D
134 149Right-handed alpha
Helix 51
51
D
151 157Right-handed alpha
Helix 52
52
D
173 184Right-handed alpha
Helix 53
53
D
199 207Right-handed alpha
Helix 54
54
D
207 216Right-handed alpha
Helix 55
55
D
218 248Right-handed alpha
Helix 56
56
D
255 260Right-handed alpha
Helix 57
57
D
263 276Right-handed alpha
Helix 58
58
D
279 288Right-handed alpha
Helix 59
59
D
289 291Right-handed 310
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There are 9 sheets in PDB entry 2E89. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 91first strand
Strand 2
A
55 62parallel
Strand 3
A
26 30parallel
Strand 4
A
128 130parallel
Strand 5
A
165 166parallel
Strand 6
A
161 162anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 250first strand
Strand 2
A
253 255anti-parallel
Strand 3
A
310 313anti-parallel
Strand 4
A
303 306anti-parallel
Strand 5
A
295 297anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
87 91first strand
Strand 2
B
55 62parallel
Strand 3
B
26 30parallel
Strand 4
B
128 130parallel
Strand 5
B
165 166parallel
Strand 6
B
161 162anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
294 297first strand
Strand 2
B
303 306anti-parallel
Strand 3
B
311 313anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
87 91first strand
Strand 2
C
55 62parallel
Strand 3
C
26 30parallel
Strand 4
C
128 130parallel
Strand 5
C
165 166parallel
Strand 6
C
161 162anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
249 250first strand
Strand 2
C
253 255anti-parallel
Strand 3
C
310 313anti-parallel
Strand 4
C
303 306anti-parallel
Strand 5
C
295 297anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
55 57first strand
Strand 2
D
26 29parallel
Strand 3
D
128 130parallel
Strand 4
D
165 166parallel
Strand 5
D
161 162anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
60 62first strand
Strand 2
D
89 91parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
296 299first strand
Strand 2
D
302 304anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il