Analysis of interatomic Contacts of Structural Units in PDB entry:
2F6R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2F6R entry

There is 1 chain in PDB entry 2F6R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 16PRO 262
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 2F6R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
75 87Right-handed alpha
Helix 2
2
A
93 101Right-handed alpha
Helix 3
3
A
107 116Right-handed alpha
Helix 4
4
A
117 120Right-handed 310
Helix 5
5
A
127 136Right-handed alpha
Helix 6
6
A
138 167Right-handed alpha
Helix 7
7
A
183 188Right-handed 310
Helix 8
8
A
197 210Right-handed alpha
Helix 9
9
A
212 222Right-handed alpha
Helix 10
10
A
225 232Right-handed alpha
Helix 11
11
A
242 261Right-handed alpha
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There are 2 sheets in PDB entry 2F6R. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 23first strand
Strand 2
A
44 45anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 92first strand
Strand 2
A
171 175parallel
Strand 3
A
64 70parallel
Strand 4
A
190 195parallel
Strand 5
A
235 238parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il