Analysis of interatomic Contacts of Structural Units in PDB entry:
2FBE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FBE entry

There are 4 chains in PDB entry 2FBE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1ASN 188
B
 GLY 1SER 198
C
 GLY 1GLU 199
D
 GLY 1SER 190
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 2FBE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 9Right-handed 310
Helix 2
2
B
95 98Right-handed 310
Helix 3
3
B
188 193Right-handed 310
Helix 4
4
C
95 98Right-handed 310
Helix 5
5
C
188 193Right-handed 310
Helix 6
6
D
5 9Right-handed 310
Helix 7
7
D
95 98Right-handed 310
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There are 8 sheets in PDB entry 2FBE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 25first strand
Strand 2
A
31 34anti-parallel
Strand 3
A
181 183anti-parallel
Strand 4
A
64 70anti-parallel
Strand 5
A
129 135anti-parallel
Strand 6
A
140 145anti-parallel
Strand 7
A
151 155anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 55first strand
Strand 2
A
164 171anti-parallel
Strand 3
A
76 83anti-parallel
Strand 4
A
100 106anti-parallel
Strand 5
A
110 113anti-parallel
Strand 6
A
119 121anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 25first strand
Strand 2
B
31 34anti-parallel
Strand 3
B
181 184anti-parallel
Strand 4
B
64 70anti-parallel
Strand 5
B
129 135anti-parallel
Strand 6
B
140 145anti-parallel
Strand 7
B
150 155anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 55first strand
Strand 2
B
164 170anti-parallel
Strand 3
B
77 83anti-parallel
Strand 4
B
100 106anti-parallel
Strand 5
B
110 113anti-parallel
Strand 6
B
119 120anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
23 25first strand
Strand 2
C
31 34anti-parallel
Strand 3
C
181 184anti-parallel
Strand 4
C
64 70anti-parallel
Strand 5
C
129 135anti-parallel
Strand 6
C
140 145anti-parallel
Strand 7
C
150 155anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 55first strand
Strand 2
C
164 169anti-parallel
Strand 3
C
77 83anti-parallel
Strand 4
C
100 106anti-parallel
Strand 5
C
110 113anti-parallel
Strand 6
C
119 121anti-parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
23 25first strand
Strand 2
D
31 34anti-parallel
Strand 3
D
181 183anti-parallel
Strand 4
D
64 70anti-parallel
Strand 5
D
129 135anti-parallel
Strand 6
D
140 145anti-parallel
Strand 7
D
151 155anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
53 55first strand
Strand 2
D
164 171anti-parallel
Strand 3
D
76 83anti-parallel
Strand 4
D
100 106anti-parallel
Strand 5
D
110 113anti-parallel
Strand 6
D
119 121anti-parallel
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