Analysis of interatomic Contacts of Structural Units in PDB entry:
2FH5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FH5 entry

There are 2 chains in PDB entry 2FH5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
HIS 0LYS 129
B
ARG 63ALA 269
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2FH5. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
27 36Right-handed alpha
Helix 2
2
A
37 40Right-handed 310
Helix 3
3
A
72 74Right-handed 310
Helix 4
4
A
75 94Right-handed alpha
Helix 5
5
A
94 100Right-handed alpha
Helix 6
6
A
103 108Right-handed alpha
Helix 7
7
A
113 128Right-handed alpha
Helix 8
8
B
74 85Right-handed alpha
Helix 9
9
B
119 131Right-handed alpha
Helix 10
10
B
145 166Right-handed alpha
Helix 11
11
B
187 206Right-handed alpha
Helix 12
12
B
231 235Right-handed 310
Helix 13
13
B
258 269Right-handed alpha
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There are 2 sheets in PDB entry 2FH5. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
14 18first strand
Strand 2
A
4 9anti-parallel
Strand 3
A
64 70anti-parallel
Strand 4
A
53 59anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
97 102first strand
Strand 2
B
110 115anti-parallel
Strand 3
B
64 68parallel
Strand 4
B
134 142parallel
Strand 5
B
172 178parallel
Strand 6
B
239 243parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il