Analysis of interatomic Contacts of Structural Units in PDB entry:
2FMV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FMV entry

There is 1 chain in PDB entry 2FMV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 10SER 234
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There is 1 helix in PDB entry 2FMV. Click on helix number for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
56 60Right-handed 310
Back to top of page

There are 4 sheets in PDB entry 2FMV. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
13 17first strand
Strand 2
A
114 120anti-parallel
Strand 3
A
45 52anti-parallel
Strand 4
A
92 94anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
32 37first strand
Strand 2
A
99 105anti-parallel
Strand 3
A
63 68anti-parallel
Strand 4
A
76 81anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
128 132first strand
Strand 2
A
153 159parallel
Strand 3
A
212 218anti-parallel
Strand 4
A
189 191anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
137 140first strand
Strand 2
A
229 233anti-parallel
Strand 3
A
167 173anti-parallel
Strand 4
A
206 207anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il