Analysis of interatomic Contacts of Structural Units in PDB entry:
2FY2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2FY2 entry

There is 1 chain in PDB entry 2FY2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 8LEU 607
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 2FY2. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
20 33Right-handed alpha
Helix 2
2
A
34 36Right-handed 310
Helix 3
3
A
37 52Right-handed alpha
Helix 4
4
A
56 72Right-handed alpha
Helix 5
5
A
76 85Right-handed alpha
Helix 6
6
A
91 96Right-handed alpha
Helix 7
7
A
109 133Right-handed alpha
Helix 8
8
A
152 158Right-handed 310
Helix 9
9
A
207 223Right-handed alpha
Helix 10
10
A
224 228Right-handed 310
Helix 11
11
A
231 238Right-handed 310
Helix 12
12
A
239 252Right-handed alpha
Helix 13
13
A
253 265Right-handed alpha
Helix 14
14
A
281 292Right-handed alpha
Helix 15
15
A
328 344Right-handed alpha
Helix 16
16
A
370 390Right-handed alpha
Helix 17
17
A
402 408Right-handed alpha
Helix 18
18
A
412 430Right-handed alpha
Helix 19
19
A
456 468Right-handed alpha
Helix 20
20
A
469 472Right-handed 310
Helix 21
21
A
474 498Right-handed alpha
Helix 22
22
A
502 517Right-handed alpha
Helix 23
23
A
521 526Right-handed alpha
Helix 24
24
A
526 533Right-handed alpha
Helix 25
25
A
585 605Right-handed alpha
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There are 4 sheets in PDB entry 2FY2. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
204 205first strand
Strand 2
A
193 201anti-parallel
Strand 3
A
363 364anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
204 205first strand
Strand 2
A
193 201anti-parallel
Strand 3
A
184 190anti-parallel
Strand 4
A
269 272parallel
Strand 5
A
308 312parallel
Strand 6
A
318 322anti-parallel
Strand 7
A
99 101anti-parallel
Strand 8
A
549 551anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
161 164first strand
Strand 2
A
171 174anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
391 398first strand
Strand 2
A
571 578anti-parallel
Strand 3
A
560 566anti-parallel
Strand 4
A
537 541parallel
Strand 5
A
435 440parallel
Strand 6
A
449 451anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il