Analysis of interatomic Contacts of Structural Units in PDB entry:
2G01


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2G01 entry

There are 4 chains in PDB entry 2G01 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 10HIS 365
F
 PRO 554PHE 563
B
 ASN 9HIS 365
G
 PRO 554PHE 563
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 2G01. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
66 79Right-handed alpha
Helix 2
2
A
117 121Right-handed 310
Helix 3
3
A
125 144Right-handed alpha
Helix 4
4
A
153 155Right-handed 310
Helix 5
5
A
188 192Right-handed 310
Helix 6
6
A
193 198Right-handed alpha
Helix 7
7
A
205 221Right-handed alpha
Helix 8
8
A
229 242Right-handed alpha
Helix 9
9
A
245 252Right-handed alpha
Helix 10
10
A
253 263Right-handed alpha
Helix 11
11
A
270 275Right-handed alpha
Helix 12
12
A
276 280Right-handed 310
Helix 13
13
A
290 302Right-handed alpha
Helix 14
14
A
311 317Right-handed alpha
Helix 15
15
A
326 330Right-handed 310
Helix 16
16
A
350 361Right-handed alpha
Helix 17
17
B
64 78Right-handed alpha
Helix 18
18
B
115 119Right-handed alpha
Helix 19
19
B
124 140Right-handed alpha
Helix 20
20
B
153 155Right-handed 310
Helix 21
21
B
188 192Right-handed 310
Helix 22
22
B
193 198Right-handed alpha
Helix 23
23
B
206 221Right-handed alpha
Helix 24
24
B
232 241Right-handed alpha
Helix 25
25
B
245 250Right-handed alpha
Helix 26
26
B
253 261Right-handed alpha
Helix 27
27
B
270 275Right-handed alpha
Helix 28
28
B
290 295Right-handed alpha
Helix 29
29
B
311 316Right-handed alpha
Helix 30
30
B
318 323Right-handed alpha
Helix 31
31
B
326 331Right-handed alpha
Helix 32
32
B
348 361Right-handed alpha
Helix 33
33
B
362 364Right-handed 310
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There are 8 sheets in PDB entry 2G01. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 33first strand
Strand 2
A
40 44anti-parallel
Strand 3
A
51 55anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 92first strand
Strand 2
A
105 108anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 158first strand
Strand 2
A
166 167anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 14first strand
Strand 2
B
19 22anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 34first strand
Strand 2
B
38 41anti-parallel
Strand 3
B
50 57anti-parallel
Strand 4
B
44 45anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 34first strand
Strand 2
B
38 41anti-parallel
Strand 3
B
50 57anti-parallel
Strand 4
B
104 109anti-parallel
Strand 5
B
88 92anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
113 114first strand
Strand 2
B
157 159anti-parallel
Strand 3
B
165 167anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 148first strand
Strand 2
B
174 175anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il