Analysis of interatomic Contacts of Structural Units in PDB entry:
2G47

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2G47 entry

There are 4 chains in PDB entry 2G47 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 45	ALA 1016
B	ASN 44	PHE 1014
C	ASP 1	ASP 23
D	ASP 1	ASP 23

There are 89 helices in PDB entry 2G47. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	95	99	Right-handed 310
Helix 2	2	A	105	114	Right-handed alpha
Helix 3	3	A	125	134	Right-handed alpha
Helix 4	4	A	157	167	Right-handed alpha
Helix 5	5	A	168	170	Right-handed 310
Helix 6	6	A	175	195	Right-handed alpha
Helix 7	7	A	196	208	Right-handed alpha
Helix 8	8	A	213	217	Right-handed 310
Helix 9	9	A	222	227	Right-handed alpha
Helix 10	10	A	227	233	Right-handed alpha
Helix 11	11	A	236	249	Right-handed alpha
Helix 12	12	A	250	252	Right-handed 310
Helix 13	13	A	263	276	Right-handed alpha
Helix 14	14	A	294	298	Right-handed 310
Helix 15	15	A	322	326	Right-handed 310
Helix 16	16	A	329	339	Right-handed alpha
Helix 17	17	A	345	353	Right-handed alpha
Helix 18	18	A	380	386	Right-handed alpha
Helix 19	19	A	386	405	Right-handed alpha
Helix 20	20	A	407	424	Right-handed alpha
Helix 21	21	A	429	441	Right-handed alpha
Helix 22	22	A	445	449	Right-handed 310
Helix 23	23	A	460	469	Right-handed alpha
Helix 24	24	A	470	471	Right-handed 310
Helix 25	25	A	472	475	Right-handed 310
Helix 26	26	A	483	486	Right-handed 310
Helix 27	27	A	506	515	Right-handed alpha
Helix 28	28	A	581	584	Right-handed 310
Helix 29	29	A	586	614	Right-handed alpha
Helix 30	30	A	637	650	Right-handed alpha
Helix 31	31	A	655	672	Right-handed alpha
Helix 32	32	A	673	676	Right-handed 310
Helix 33	33	A	677	691	Right-handed alpha
Helix 34	34	A	696	705	Right-handed alpha
Helix 35	35	A	708	721	Right-handed alpha
Helix 36	36	A	734	754	Right-handed alpha
Helix 37	37	A	759	763	Right-handed 310
Helix 38	38	A	801	824	Right-handed alpha
Helix 39	39	A	855	877	Right-handed alpha
Helix 40	40	A	878	895	Right-handed alpha
Helix 41	41	A	899	913	Right-handed alpha
Helix 42	42	A	919	929	Right-handed alpha
Helix 43	43	A	932	944	Right-handed alpha
Helix 44	44	A	994	1001	Right-handed alpha
Helix 45	45	B	95	99	Right-handed 310
Helix 46	46	B	105	114	Right-handed alpha
Helix 47	47	B	115	117	Right-handed 310
Helix 48	48	B	125	134	Right-handed alpha
Helix 49	49	B	157	167	Right-handed alpha
Helix 50	50	B	168	170	Right-handed 310
Helix 51	51	B	175	195	Right-handed alpha
Helix 52	52	B	196	208	Right-handed alpha
Helix 53	53	B	213	217	Right-handed 310
Helix 54	54	B	222	227	Right-handed alpha
Helix 55	55	B	227	233	Right-handed alpha
Helix 56	56	B	236	249	Right-handed alpha
Helix 57	57	B	250	252	Right-handed 310
Helix 58	58	B	263	276	Right-handed alpha
Helix 59	59	B	294	298	Right-handed 310
Helix 60	60	B	322	326	Right-handed 310
Helix 61	61	B	329	339	Right-handed alpha
Helix 62	62	B	345	353	Right-handed alpha
Helix 63	63	B	380	386	Right-handed alpha
Helix 64	64	B	386	405	Right-handed alpha
Helix 65	65	B	407	424	Right-handed alpha
Helix 66	66	B	429	441	Right-handed alpha
Helix 67	67	B	445	449	Right-handed 310
Helix 68	68	B	460	469	Right-handed alpha
Helix 69	69	B	470	471	Right-handed 310
Helix 70	70	B	472	475	Right-handed 310
Helix 71	71	B	483	486	Right-handed 310
Helix 72	72	B	506	515	Right-handed alpha
Helix 73	73	B	581	584	Right-handed 310
Helix 74	74	B	586	614	Right-handed alpha
Helix 75	75	B	637	652	Right-handed alpha
Helix 76	76	B	655	672	Right-handed alpha
Helix 77	77	B	673	676	Right-handed 310
Helix 78	78	B	677	691	Right-handed alpha
Helix 79	79	B	696	705	Right-handed alpha
Helix 80	80	B	708	721	Right-handed alpha
Helix 81	81	B	734	754	Right-handed alpha
Helix 82	82	B	759	763	Right-handed 310
Helix 83	83	B	801	824	Right-handed alpha
Helix 84	84	B	855	877	Right-handed alpha
Helix 85	85	B	878	895	Right-handed alpha
Helix 86	86	B	899	913	Right-handed alpha
Helix 87	87	B	919	929	Right-handed alpha
Helix 88	88	B	932	944	Right-handed alpha
Helix 89	89	B	994	1001	Right-handed alpha

There are 10 sheets in PDB entry 2G47. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	50	first strand
Strand 2	A	63	69	anti-parallel
Strand 3	A	74	79	anti-parallel
Strand 4	A	254	260	parallel
Strand 5	A	85	92	anti-parallel
Strand 6	A	147	154	anti-parallel
Strand 7	A	137	142	anti-parallel
Strand 8	C	18	19	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	359	367	first strand
Strand 2	A	370	378	anti-parallel
Strand 3	A	312	319	anti-parallel
Strand 4	A	477	481	anti-parallel
Strand 5	A	300	304	parallel
Strand 6	A	499	504	anti-parallel
Strand 7	A	491	492	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	549	553	first strand
Strand 2	A	557	563	anti-parallel
Strand 3	A	722	731	parallel
Strand 4	A	571	579	anti-parallel
Strand 5	A	626	634	anti-parallel
Strand 6	A	616	622	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	549	553	first strand
Strand 2	A	557	563	anti-parallel
Strand 3	A	722	731	parallel
Strand 4	A	756	757	parallel

Back to list of sheets
Back to top of page

There are 6 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	832	840	first strand
Strand 2	A	843	852	anti-parallel
Strand 3	A	789	799	anti-parallel
Strand 4	A	952	959	anti-parallel
Strand 5	A	775	782	parallel
Strand 6	A	990	991	parallel

Back to list of sheets
Back to top of page

There are 8 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	50	first strand
Strand 2	B	63	69	anti-parallel
Strand 3	B	74	79	anti-parallel
Strand 4	B	254	260	parallel
Strand 5	B	85	92	anti-parallel
Strand 6	B	147	154	anti-parallel
Strand 7	B	137	142	anti-parallel
Strand 8	D	18	19	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	359	367	first strand
Strand 2	B	370	378	anti-parallel
Strand 3	B	312	319	anti-parallel
Strand 4	B	477	481	anti-parallel
Strand 5	B	300	304	parallel
Strand 6	B	499	504	anti-parallel
Strand 7	B	491	492	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	549	553	first strand
Strand 2	B	557	563	anti-parallel
Strand 3	B	722	731	parallel
Strand 4	B	571	579	anti-parallel
Strand 5	B	626	634	anti-parallel
Strand 6	B	616	622	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	549	553	first strand
Strand 2	B	557	563	anti-parallel
Strand 3	B	722	731	parallel
Strand 4	B	756	757	parallel

Back to list of sheets
Back to top of page

There are 6 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	833	840	first strand
Strand 2	B	843	852	anti-parallel
Strand 3	B	789	799	anti-parallel
Strand 4	B	952	959	anti-parallel
Strand 5	B	775	782	parallel
Strand 6	B	990	991	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2G47

Analysis of interatomic Contacts of Structural Units in PDB entry:
2G47