Analysis of interatomic Contacts of Structural Units in PDB entry:
2G5C

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2G5C entry

There are 4 chains in PDB entry 2G5C (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MSE 30	ILE 310
B	GLN 31	ILE 310
C	MSE 30	ARG 307
D	MSE 30	ARG 307

There are 61 helices in PDB entry 2G5C. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	39	52	Right-handed alpha
Helix 2	2	A	64	74	Right-handed alpha
Helix 3	3	A	83	90	Right-handed 310
Helix 4	4	A	100	115	Right-handed alpha
Helix 5	5	A	129	140	Right-handed alpha
Helix 6	6	A	156	160	Right-handed 310
Helix 7	7	A	179	193	Right-handed alpha
Helix 8	8	A	201	213	Right-handed alpha
Helix 9	9	A	213	231	Right-handed alpha
Helix 10	10	A	236	240	Right-handed 310
Helix 11	11	A	244	248	Right-handed 310
Helix 12	12	A	255	266	Right-handed alpha
Helix 13	13	A	266	290	Right-handed alpha
Helix 14	14	A	292	309	Right-handed alpha
Helix 15	15	B	39	52	Right-handed alpha
Helix 16	16	B	64	74	Right-handed alpha
Helix 17	17	B	83	90	Right-handed 310
Helix 18	18	B	100	102	Right-handed 310
Helix 19	19	B	103	115	Right-handed alpha
Helix 20	20	B	129	140	Right-handed alpha
Helix 21	21	B	156	160	Right-handed 310
Helix 22	22	B	179	193	Right-handed alpha
Helix 23	23	B	201	213	Right-handed alpha
Helix 24	24	B	213	231	Right-handed alpha
Helix 25	25	B	236	254	Right-handed 310
Helix 26	26	B	255	266	Right-handed alpha
Helix 27	27	B	266	290	Right-handed alpha
Helix 28	28	B	292	309	Right-handed alpha
Helix 29	29	C	39	52	Right-handed alpha
Helix 30	30	C	64	74	Right-handed alpha
Helix 31	31	C	83	91	Right-handed 310
Helix 32	32	C	100	102	Right-handed 310
Helix 33	33	C	103	115	Right-handed alpha
Helix 34	34	C	129	140	Right-handed alpha
Helix 35	35	C	156	160	Right-handed 310
Helix 36	36	C	179	193	Right-handed alpha
Helix 37	37	C	201	213	Right-handed alpha
Helix 38	38	C	213	230	Right-handed alpha
Helix 39	39	C	236	240	Right-handed 310
Helix 40	40	C	242	250	Right-handed alpha
Helix 41	41	C	251	254	Right-handed 310
Helix 42	42	C	255	266	Right-handed alpha
Helix 43	43	C	266	290	Right-handed alpha
Helix 44	44	C	292	302	Right-handed alpha
Helix 45	45	D	39	52	Right-handed alpha
Helix 46	46	D	64	74	Right-handed alpha
Helix 47	47	D	83	91	Right-handed 310
Helix 48	48	D	100	102	Right-handed 310
Helix 49	49	D	103	115	Right-handed alpha
Helix 50	50	D	129	140	Right-handed alpha
Helix 51	51	D	156	160	Right-handed 310
Helix 52	52	D	179	193	Right-handed alpha
Helix 53	53	D	201	213	Right-handed alpha
Helix 54	54	D	213	230	Right-handed alpha
Helix 55	55	D	236	240	Right-handed 310
Helix 56	56	D	242	249	Right-handed alpha
Helix 57	57	D	250	254	Right-handed 310
Helix 58	58	D	255	266	Right-handed alpha
Helix 59	59	D	266	290	Right-handed alpha
Helix 60	60	D	292	301	Right-handed alpha
Helix 61	61	D	302	305	Right-handed 310

There are 8 sheets in PDB entry 2G5C. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	79	81	first strand
Strand 2	A	57	61	parallel
Strand 3	A	32	36	parallel
Strand 4	A	94	97	parallel
Strand 5	A	120	123	parallel
Strand 6	A	143	144	parallel

Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	146	149	first strand
Strand 2	A	169	172	anti-parallel
Strand 3	A	196	199	parallel

Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	79	81	first strand
Strand 2	B	57	61	parallel
Strand 3	B	32	36	parallel
Strand 4	B	94	97	parallel
Strand 5	B	120	123	parallel
Strand 6	B	143	144	parallel

Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	148	first strand
Strand 2	B	169	172	anti-parallel
Strand 3	B	196	199	parallel

Back to list of sheets
Back to top of page

There are 6 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	79	81	first strand
Strand 2	C	57	61	parallel
Strand 3	C	32	36	parallel
Strand 4	C	94	97	parallel
Strand 5	C	120	123	parallel
Strand 6	C	143	144	parallel

Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	146	148	first strand
Strand 2	C	169	172	anti-parallel
Strand 3	C	196	199	parallel

Back to list of sheets
Back to top of page

There are 6 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	79	81	first strand
Strand 2	D	57	61	parallel
Strand 3	D	32	36	parallel
Strand 4	D	94	97	parallel
Strand 5	D	120	123	parallel
Strand 6	D	143	144	parallel

Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	146	148	first strand
Strand 2	D	169	172	anti-parallel
Strand 3	D	196	199	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2G5C

Analysis of interatomic Contacts of Structural Units in PDB entry:
2G5C