Analysis of interatomic Contacts of Structural Units in PDB entry:
2H59


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2H59 entry

There are 4 chains in PDB entry 2H59 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1SER 246
B
MET 1SER 246
D
HIS 9PHE 14
E
HIS 9PHE 14
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 2H59. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
3 13Right-handed alpha
Helix 2
2
A
22 29Right-handed 310
Helix 3
3
A
38 42Right-handed 310
Helix 4
4
A
44 48Right-handed 310
Helix 5
5
A
49 56Right-handed alpha
Helix 6
6
A
56 68Right-handed alpha
Helix 7
7
A
69 74Right-handed 310
Helix 8
8
A
77 89Right-handed alpha
Helix 9
9
A
102 107Right-handed alpha
Helix 10
10
A
133 140Right-handed alpha
Helix 11
11
A
167 181Right-handed alpha
Helix 12
12
A
195 197Right-handed 310
Helix 13
13
A
198 207Right-handed alpha
Helix 14
14
A
220 224Right-handed 310
Helix 15
15
A
231 242Right-handed alpha
Helix 16
16
B
3 13Right-handed alpha
Helix 17
17
B
22 29Right-handed 310
Helix 18
18
B
38 42Right-handed 310
Helix 19
19
B
44 48Right-handed 310
Helix 20
20
B
49 56Right-handed alpha
Helix 21
21
B
56 68Right-handed alpha
Helix 22
22
B
69 74Right-handed 310
Helix 23
23
B
77 89Right-handed alpha
Helix 24
24
B
102 107Right-handed alpha
Helix 25
25
B
133 140Right-handed alpha
Helix 26
26
B
167 181Right-handed alpha
Helix 27
27
B
195 197Right-handed 310
Helix 28
28
B
198 207Right-handed alpha
Helix 29
29
B
220 224Right-handed 310
Helix 30
30
B
231 242Right-handed alpha
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There are 6 sheets in PDB entry 2H59. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
112 114first strand
Strand 2
A
94 97parallel
Strand 3
A
16 20parallel
Strand 4
A
183 187parallel
Strand 5
A
209 213parallel
Strand 6
A
226 228parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
130 132first strand
Strand 2
A
117 124anti-parallel
Strand 3
A
155 159anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
193 194first strand
Strand 2
D
12 13anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
112 114first strand
Strand 2
B
94 97parallel
Strand 3
B
16 20parallel
Strand 4
B
183 187parallel
Strand 5
B
209 213parallel
Strand 6
B
226 228parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
130 132first strand
Strand 2
B
117 124anti-parallel
Strand 3
B
155 159anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
193 194first strand
Strand 2
E
12 13anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il