Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 2HSQ entry
There are 2 chains in PDB entry 2HSQ
(CSU analysis of residue contacts immediately below table)
Chain ID |
Initial residue | Terminal residue |
A
|
MET -7 | TRP 258 |
B
|
ALA 565 | THR 587 |
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There are 10
helices in PDB entry 2HSQ. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
Helix 1 |
1 | A
| 6 |
25 | Right-handed alpha |
Helix 2 |
2 | A
| 40 |
62 | Right-handed alpha |
Helix 3 |
3 | A
| 67 |
72 | Right-handed alpha |
Helix 4 |
4 | A
| 74 |
97 | Right-handed alpha |
Helix 5 |
5 | A
| 101 |
149 | Right-handed alpha |
Helix 6 |
6 | A
| 153 |
182 | Right-handed alpha |
Helix 7 |
7 | A
| 184 |
216 | Right-handed alpha |
Helix 8 |
8 | A
| 222 |
251 | Right-handed alpha |
Helix 9 |
9 | B
| 565 |
579 | Right-handed alpha |
Helix 10 |
10 | B
| 580 |
585 | Right-handed 310 |
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There are no sheets in PDB entry
2HSQ
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il