Analysis of interatomic Contacts of Structural Units in PDB entry:
2J1G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2J1G entry

There are 6 chains in PDB entry 2J1G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 76PRO 287
B
 PRO 72ALA 288
C
 CYS 73ALA 288
D
 THR 75ALA 288
E
 ASN 71ALA 288
F
 PRO 72ALA 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 2J1G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
79 86Right-handed alpha
Helix 2
2
A
133 140Right-handed alpha
Helix 3
3
A
151 158Right-handed alpha
Helix 4
4
A
232 237Right-handed alpha
Helix 5
5
B
79 86Right-handed alpha
Helix 6
6
B
111 115Right-handed 310
Helix 7
7
B
133 140Right-handed alpha
Helix 8
8
B
151 160Right-handed alpha
Helix 9
9
B
189 193Right-handed 310
Helix 10
10
B
210 214Right-handed 310
Helix 11
11
B
231 236Right-handed alpha
Helix 12
12
C
79 86Right-handed alpha
Helix 13
13
C
111 115Right-handed 310
Helix 14
14
C
133 140Right-handed alpha
Helix 15
15
C
151 160Right-handed alpha
Helix 16
16
C
189 193Right-handed 310
Helix 17
17
C
210 214Right-handed 310
Helix 18
18
C
231 236Right-handed alpha
Helix 19
19
D
79 86Right-handed alpha
Helix 20
20
D
133 140Right-handed alpha
Helix 21
21
D
151 161Right-handed alpha
Helix 22
22
D
189 193Right-handed 310
Helix 23
23
D
210 214Right-handed 310
Helix 24
24
D
231 236Right-handed alpha
Helix 25
25
E
71 75Right-handed 310
Helix 26
26
E
79 86Right-handed alpha
Helix 27
27
E
133 140Right-handed alpha
Helix 28
28
E
151 160Right-handed alpha
Helix 29
29
E
189 193Right-handed 310
Helix 30
30
E
210 214Right-handed 310
Helix 31
31
E
231 236Right-handed alpha
Helix 32
32
F
79 86Right-handed alpha
Helix 33
33
F
133 140Right-handed alpha
Helix 34
34
F
151 160Right-handed alpha
Helix 35
35
F
189 193Right-handed 310
Helix 36
36
F
210 214Right-handed 310
Helix 37
37
F
231 236Right-handed alpha
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There are 25 sheets in PDB entry 2J1G. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, BD, BE, CA, CB, CC, CD, DA, DB, C, EA, EB, EC, ED, FA, FB, FC, FD,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 97first strand
Strand 2
A
103 109anti-parallel
Strand 3
A
117 123anti-parallel
Strand 4
A
280 285anti-parallel
Strand 5
A
166 171anti-parallel
Strand 6
A
177 182anti-parallel
Strand 7
A
201 203anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 97first strand
Strand 2
A
103 109anti-parallel
Strand 3
A
117 123anti-parallel
Strand 4
A
148 149anti-parallel
Strand 5
A
141 142anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 187first strand
Strand 2
A
196 197anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 249first strand
Strand 2
A
267 268anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 258first strand
Strand 2
A
276 277anti-parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 97first strand
Strand 2
B
103 109anti-parallel
Strand 3
B
117 123anti-parallel
Strand 4
B
280 287anti-parallel
Strand 5
B
164 171anti-parallel
Strand 6
B
177 182anti-parallel
Strand 7
B
201 203anti-parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 97first strand
Strand 2
B
103 109anti-parallel
Strand 3
B
117 123anti-parallel
Strand 4
B
148 149anti-parallel
Strand 5
B
141 142anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 187first strand
Strand 2
B
196 198anti-parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
248 249first strand
Strand 2
B
267 268anti-parallel
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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
257 258first strand
Strand 2
B
276 277anti-parallel
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There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
92 97first strand
Strand 2
C
103 109anti-parallel
Strand 3
C
117 123anti-parallel
Strand 4
C
280 287anti-parallel
Strand 5
C
164 171anti-parallel
Strand 6
C
177 182anti-parallel
Strand 7
C
201 203anti-parallel
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There are 5 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
92 97first strand
Strand 2
C
103 109anti-parallel
Strand 3
C
117 123anti-parallel
Strand 4
C
148 149anti-parallel
Strand 5
C
141 142anti-parallel
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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
185 187first strand
Strand 2
C
196 198anti-parallel
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There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
257 258first strand
Strand 2
C
276 277anti-parallel
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There are 10 strands in DA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
92 97first strand
Strand 2
D
103 109anti-parallel
Strand 3
D
117 123anti-parallel
Strand 4
D
141 142first strand
Strand 5
D
148 149anti-parallel
Strand 6
D
117 123anti-parallel
Strand 7
D
196 198first strand
Strand 8
D
177 187anti-parallel
Strand 9
D
201 203anti-parallel
Strand 10
D
177 187anti-parallel
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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
248 249first strand
Strand 2
D
267 268anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
257 258first strand
Strand 2
D
276 277anti-parallel
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There are 11 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
92 97first strand
Strand 2
E
103 109anti-parallel
Strand 3
E
117 123anti-parallel
Strand 4
E
141 142first strand
Strand 5
E
148 149anti-parallel
Strand 6
E
117 123anti-parallel
Strand 7
E
201 203first strand
Strand 8
E
177 182anti-parallel
Strand 9
E
164 171anti-parallel
Strand 10
E
280 287anti-parallel
Strand 11
E
117 123anti-parallel
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There are 2 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
185 187first strand
Strand 2
E
196 198anti-parallel
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There are 2 strands in EC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
248 249first strand
Strand 2
E
267 268anti-parallel
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There are 2 strands in ED sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
257 258first strand
Strand 2
E
276 277anti-parallel
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There are 11 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
92 97first strand
Strand 2
F
103 109anti-parallel
Strand 3
F
117 123anti-parallel
Strand 4
F
141 142first strand
Strand 5
F
148 149anti-parallel
Strand 6
F
117 123anti-parallel
Strand 7
F
201 203first strand
Strand 8
F
177 182anti-parallel
Strand 9
F
164 171anti-parallel
Strand 10
F
280 287anti-parallel
Strand 11
F
117 123anti-parallel
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There are 2 strands in FB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
185 187first strand
Strand 2
F
196 198anti-parallel
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There are 2 strands in FC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
248 249first strand
Strand 2
F
267 268anti-parallel
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There are 2 strands in FD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
257 258first strand
Strand 2
F
276 277anti-parallel
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