Analysis of interatomic Contacts of Structural Units in PDB entry:
2J7T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2J7T entry

There is 1 chain in PDB entry 2J7T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 25GLU 317
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2J7T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 34Right-handed 310
Helix 2
2
A
74 88Right-handed alpha
Helix 3
3
A
118 126Right-handed alpha
Helix 4
4
A
130 151Right-handed alpha
Helix 5
5
A
159 161Right-handed 310
Helix 6
6
A
176 188Right-handed alpha
Helix 7
7
A
195 199Right-handed 310
Helix 8
8
A
200 209Right-handed alpha
Helix 9
9
A
216 233Right-handed alpha
Helix 10
10
A
241 252Right-handed alpha
Helix 11
11
A
259 263Right-handed 310
Helix 12
12
A
264 275Right-handed alpha
Helix 13
13
A
284 289Right-handed alpha
Helix 14
14
A
300 315Right-handed alpha
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There are 2 sheets in PDB entry 2J7T. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 43first strand
Strand 2
A
50 55anti-parallel
Strand 3
A
61 67anti-parallel
Strand 4
A
106 111anti-parallel
Strand 5
A
96 101anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 117first strand
Strand 2
A
163 165anti-parallel
Strand 3
A
171 173anti-parallel
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