Analysis of interatomic Contacts of Structural Units in PDB entry:
2J7Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2J7Y entry

There are 2 chains in PDB entry 2J7Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 217HIS 453
B
 GLN 343ASP 351
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 2J7Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
219 230Right-handed alpha
Helix 2
2
A
245 271Right-handed alpha
Helix 3
3
A
273 277Right-handed 310
Helix 4
4
A
278 303Right-handed alpha
Helix 5
5
A
320 325Right-handed 310
Helix 6
6
A
327 346Right-handed alpha
Helix 7
7
A
348 361Right-handed alpha
Helix 8
8
A
375 399Right-handed alpha
Helix 9
9
A
402 437Right-handed alpha
Helix 10
10
A
443 452Right-handed alpha
Helix 11
11
B
344 351Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 2J7Y.

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
308 312first strand
Strand 2
A
315 318anti-parallel
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