Analysis of interatomic Contacts of Structural Units in PDB entry:
2JA4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2JA4 entry

There is 1 chain in PDB entry 2JA4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 269ASP 369
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 2JA4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
309 319Right-handed alpha
Helix 2
2
A
346 350Right-handed 310
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There are 2 sheets in PDB entry 2JA4. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 279first strand
Strand 2
A
286 292anti-parallel
Strand 3
A
362 367anti-parallel
Strand 4
A
324 330anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 279first strand
Strand 2
A
286 292anti-parallel
Strand 3
A
298 301anti-parallel
Strand 4
A
339 341parallel
Strand 5
A
354 356anti-parallel
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