Analysis of interatomic Contacts of Structural Units in PDB entry:
2JLF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2JLF entry

There are 3 chains in PDB entry 2JLF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 3PRO 663
B
 ARG 3PRO 663
C
 ARG 3PRO 663
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 93 helices in PDB entry 2JLF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 16Right-handed alpha
Helix 2
2
A
21 30Right-handed alpha
Helix 3
3
A
47 65Right-handed alpha
Helix 4
4
A
84 87Right-handed 310
Helix 5
5
A
105 111Right-handed alpha
Helix 6
6
A
120 136Right-handed alpha
Helix 7
7
A
159 183Right-handed alpha
Helix 8
8
A
185 194Right-handed alpha
Helix 9
9
A
229 235Right-handed alpha
Helix 10
10
A
250 257Right-handed alpha
Helix 11
11
A
276 297Right-handed alpha
Helix 12
12
A
298 303Right-handed alpha
Helix 13
13
A
306 316Right-handed alpha
Helix 14
14
A
327 332Right-handed alpha
Helix 15
15
A
333 348Right-handed alpha
Helix 16
16
A
350 361Right-handed alpha
Helix 17
17
A
397 418Right-handed alpha
Helix 18
18
A
419 426Right-handed 310
Helix 19
19
A
428 441Right-handed alpha
Helix 20
20
A
463 478Right-handed alpha
Helix 21
21
A
517 527Right-handed alpha
Helix 22
22
A
538 542Right-handed 310
Helix 23
23
A
546 552Right-handed 310
Helix 24
24
A
554 559Right-handed alpha
Helix 25
25
A
563 578Right-handed alpha
Helix 26
26
A
582 600Right-handed alpha
Helix 27
27
A
615 624Right-handed alpha
Helix 28
28
A
625 629Right-handed 310
Helix 29
29
A
633 637Right-handed 310
Helix 30
30
A
638 645Right-handed alpha
Helix 31
31
A
650 662Right-handed alpha
Helix 32
32
B
11 16Right-handed alpha
Helix 33
33
B
21 30Right-handed alpha
Helix 34
34
B
47 65Right-handed alpha
Helix 35
35
B
84 87Right-handed 310
Helix 36
36
B
105 111Right-handed alpha
Helix 37
37
B
120 136Right-handed alpha
Helix 38
38
B
159 183Right-handed alpha
Helix 39
39
B
185 194Right-handed alpha
Helix 40
40
B
229 235Right-handed alpha
Helix 41
41
B
250 257Right-handed alpha
Helix 42
42
B
276 297Right-handed alpha
Helix 43
43
B
298 303Right-handed alpha
Helix 44
44
B
306 316Right-handed alpha
Helix 45
45
B
327 332Right-handed alpha
Helix 46
46
B
333 348Right-handed alpha
Helix 47
47
B
350 361Right-handed alpha
Helix 48
48
B
397 418Right-handed alpha
Helix 49
49
B
419 426Right-handed 310
Helix 50
50
B
428 441Right-handed alpha
Helix 51
51
B
463 478Right-handed alpha
Helix 52
52
B
517 527Right-handed alpha
Helix 53
53
B
538 542Right-handed 310
Helix 54
54
B
546 551Right-handed 310
Helix 55
55
B
554 559Right-handed alpha
Helix 56
56
B
563 580Right-handed alpha
Helix 57
57
B
582 600Right-handed alpha
Helix 58
58
B
615 624Right-handed alpha
Helix 59
59
B
625 629Right-handed 310
Helix 60
60
B
633 637Right-handed 310
Helix 61
61
B
638 645Right-handed alpha
Helix 62
62
B
650 662Right-handed alpha
Helix 63
63
C
11 16Right-handed alpha
Helix 64
64
C
21 30Right-handed alpha
Helix 65
65
C
47 65Right-handed alpha
Helix 66
66
C
84 87Right-handed 310
Helix 67
67
C
105 111Right-handed alpha
Helix 68
68
C
120 136Right-handed alpha
Helix 69
69
C
159 183Right-handed alpha
Helix 70
70
C
185 194Right-handed alpha
Helix 71
71
C
229 235Right-handed alpha
Helix 72
72
C
250 257Right-handed alpha
Helix 73
73
C
276 297Right-handed alpha
Helix 74
74
C
298 303Right-handed alpha
Helix 75
75
C
306 316Right-handed alpha
Helix 76
76
C
327 332Right-handed alpha
Helix 77
77
C
333 348Right-handed alpha
Helix 78
78
C
350 361Right-handed alpha
Helix 79
79
C
397 418Right-handed alpha
Helix 80
80
C
419 426Right-handed 310
Helix 81
81
C
428 441Right-handed alpha
Helix 82
82
C
463 478Right-handed alpha
Helix 83
83
C
517 527Right-handed alpha
Helix 84
84
C
538 542Right-handed 310
Helix 85
85
C
546 551Right-handed 310
Helix 86
86
C
554 559Right-handed alpha
Helix 87
87
C
563 578Right-handed alpha
Helix 88
88
C
582 600Right-handed alpha
Helix 89
89
C
615 624Right-handed alpha
Helix 90
90
C
625 629Right-handed 310
Helix 91
91
C
633 637Right-handed 310
Helix 92
92
C
638 645Right-handed alpha
Helix 93
93
C
650 662Right-handed alpha
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There are 21 sheets in PDB entry 2JLF. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, BA, BB, BC, BD, BE, BF, BG, CA, CB, CC, CD, CE, CF, CG,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 8first strand
Strand 2
A
377 379anti-parallel
Strand 3
A
365 367anti-parallel
Strand 4
A
199 206parallel
Strand 5
A
265 274anti-parallel
Strand 6
A
89 94parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
43 44anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 146first strand
Strand 2
A
646 649anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 213first strand
Strand 2
A
220 222anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 228first strand
Strand 2
A
242 244anti-parallel
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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
446 451first strand
Strand 2
A
454 459anti-parallel
Strand 3
A
319 325anti-parallel
Strand 4
A
488 490anti-parallel
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There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
495 496first strand
Strand 2
A
499 502anti-parallel
Strand 3
A
513 516anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 8first strand
Strand 2
B
377 379anti-parallel
Strand 3
B
365 367anti-parallel
Strand 4
B
199 206parallel
Strand 5
B
265 274anti-parallel
Strand 6
B
89 94parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 40first strand
Strand 2
B
43 44anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
143 146first strand
Strand 2
B
646 649anti-parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
211 213first strand
Strand 2
B
220 222anti-parallel
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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
226 228first strand
Strand 2
B
242 244anti-parallel
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There are 4 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
446 451first strand
Strand 2
B
454 459anti-parallel
Strand 3
B
319 325anti-parallel
Strand 4
B
488 490anti-parallel
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There are 3 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
495 496first strand
Strand 2
B
499 502anti-parallel
Strand 3
B
513 516anti-parallel
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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
6 8first strand
Strand 2
C
377 379anti-parallel
Strand 3
C
365 367anti-parallel
Strand 4
C
199 206parallel
Strand 5
C
265 274anti-parallel
Strand 6
C
89 94parallel
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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
38 40first strand
Strand 2
C
43 44anti-parallel
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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
143 146first strand
Strand 2
C
646 649anti-parallel
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There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
211 213first strand
Strand 2
C
220 222anti-parallel
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There are 2 strands in CE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
226 228first strand
Strand 2
C
242 244anti-parallel
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There are 4 strands in CF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
446 451first strand
Strand 2
C
454 459anti-parallel
Strand 3
C
319 325anti-parallel
Strand 4
C
488 490anti-parallel
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There are 3 strands in CG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
495 496first strand
Strand 2
C
499 502anti-parallel
Strand 3
C
513 516anti-parallel
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