Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 2LB2 entry
Note, this PDB entry contains
modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is
treated as heterogroup (ligand) both in the
PDB entry and in LPC/CSU analysis.
There are 3 chains in PDB entry 2LB2
(CSU analysis of residue contacts immediately below table)
Chain ID |
Initial residue | Terminal residue |
A
|
GLY 366 | LEU 400 |
B
|
GLU 178 | GLU 178 |
B
|
PRO 180 | GLY 189 |
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There is 1
helix in PDB entry 2LB2. Click on helix number for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
Helix 1 |
1 | A
| 396 |
400 | Right-handed 310 |
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There is
1 sheet ( A) in PDB entry 2LB2.
There are 3
strands in A sheet. Click on strand of interest
for CSU analysis.
Strand number
| Chain ID |
Initial residue | Terminal residue |
Strand sense |
Strand 1 |
A
| 371 |
376 | first strand |
Strand 2 |
A
| 380 |
385 | anti-parallel |
Strand 3 |
A
| 390 |
392 | anti-parallel |
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Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il