Analysis of interatomic Contacts of Structural Units in PDB entry:
2M1X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2M1X entry

There is 1 chain in PDB entry 2M1X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 386ASP 545
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 2M1X. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
405 418Right-handed alpha
Helix 2
2
A
443 448Right-handed alpha
Helix 3
3
A
461 476Right-handed alpha
Helix 4
4
A
502 507Right-handed alpha
Helix 5
5
A
519 528Right-handed alpha
Helix 6
6
A
529 536Right-handed alpha
Helix 7
7
A
540 544Right-handed 310
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There is 1 sheet ( A) in PDB entry 2M1X.

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
399 400first strand
Strand 2
A
452 455parallel
Strand 3
A
486 490parallel
Strand 4
A
513 514parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il